RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 AMNQ9BXJ7 453 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 COL20A1Q9P218 1284 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 CDH23Q9H251 3354 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 E7EWF7 191 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 WTAPQ15007 396 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 TMEM240Q5SV17 173 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 COPS5Q92905 334 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 TAAR1Q96RJ0 339 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-218ENST00000479554 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
ATG4B-218ENST00000479554 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-218ENST00000479554 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-218ENST00000479554 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-218ENST00000479554 ZBTB5O15062 677 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 ARIH2O95376 493 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 CFBP00751 764 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 ACRP10323 421 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 GRM4Q14833 912 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 STXBP2Q15833 593 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 ARHGEF16Q5VV41 709 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 IWS1Q96ST2 819 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
ATG4B-218ENST00000479554 IL23AQ9NPF7 189 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
ATG4B-218ENST00000479554 A6NJR5 290 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 KPNA6O60684 536 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
ATG4B-218ENST00000479554 CCL23P55773 120 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 HOMER1Q86YM7 354 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-218ENST00000479554 TTYH1Q9H313 450 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-218ENST00000479554 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
ATG4B-218ENST00000479554 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
ATG4B-218ENST00000479554 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-218ENST00000479554 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 DNAJB2P25686 324 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 HSD17B4P51659 736 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 TRAF1Q13077 416 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 LY6KQ17RY6 165 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 TMEM67Q5HYA8 995 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 CCDC62Q6P9F0 684 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 CATIPQ7Z7H3 387 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 MTIF3Q9H2K0 278 aaKnown RBP16.64■□□□□ 0.25
ATG4B-218ENST00000479554 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
ATG4B-218ENST00000479554 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
ATG4B-218ENST00000479554 OPLAHO14841 1288 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 GH1P01241 217 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 GHRHRQ02643 423 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 NBPF20Q3BBV1 942 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 RASIP1Q5U651 963 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-218ENST00000479554 PIGSQ96S52 555 aa16.63■□□□□ 0.25
ATG4B-218ENST00000479554 KIAA1217Q5T5P2 1943 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 CHD9Q3L8U1 2897 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 EIF3JO75822 258 aaKnown RBP16.62■□□□□ 0.25
ATG4B-218ENST00000479554 FGBP02675 491 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 NR3C2P08235 984 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 CYP2C9P11712 490 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 ANTXR2P58335 489 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 ARHGAP1Q07960 439 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 TROAPQ12815 778 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 SAMD3Q8N6K7 520 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 AFG1LQ8WV93 481 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 TIFAQ96CG3 184 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 MAP3K20Q9NYL2 800 aaKnown RBP16.62■□□□□ 0.25
ATG4B-218ENST00000479554 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
ATG4B-218ENST00000479554 CYTH3O43739 400 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 MMP3P08254 477 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 HOXA13P31271 388 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-218ENST00000479554 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms