RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 TMEM59LQ9UK28 342 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 GPR55Q9Y2T6 319 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-207ENST00000478913 AGLP35573 1532 aa7.45□□□□□ -1.22
CCDC171-207ENST00000478913 ABCC1P33527 1531 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 TMEM82A0PJX8 343 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 STXBP3O00186 592 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 TBX1O43435 398 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 IFNGR1P15260 489 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 CCDC120Q96HB5 630 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 FCRL3Q96P31 734 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-207ENST00000478913 DNAJC7Q99615 494 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 PIF1Q9H611 641 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 MSH6P52701 1360 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 PLCH2O75038 1416 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 ATP10DQ9P241 1426 aa7.44□□□□□ -1.22
CCDC171-207ENST00000478913 DNAJC25-GNG10A0A024R161 153 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 PAX4O43316 350 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 TXKP42681 527 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 PPP2R2AP63151 447 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 DUSP4Q13115 394 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 FZD5Q13467 585 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
CCDC171-207ENST00000478913 ZNF792Q3KQV3 632 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 RALGPS1Q5JS13 557 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 RTP2Q5QGT7 225 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 ZPBP2Q6X784 338 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 ABI1Q8IZP0 508 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 NAT16Q8N8M0 369 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 MCMBPQ9BTE3 642 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 SPATA9Q9BWV2 254 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 ADAMTS10Q9H324 1103 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
CCDC171-207ENST00000478913 ADAMTS6Q9UKP5 1117 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 BACE2Q9Y5Z0 518 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
CCDC171-207ENST00000478913 XIRP1Q702N8 1843 aaKnown RBP7.43□□□□□ -1.22
CCDC171-207ENST00000478913 AURKAO14965 403 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 DIAPH1O60610 1272 aaKnown RBP7.42□□□□□ -1.22
CCDC171-207ENST00000478913 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
CCDC171-207ENST00000478913 ZGLP1P0C6A0 271 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 RGS19P49795 217 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 SCRN1Q12765 414 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 KRT27Q7Z3Y8 459 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 ABHD8Q96I13 439 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 FCRL2Q96LA5 508 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-207ENST00000478913 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
CCDC171-207ENST00000478913 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 RC3H2Q9HBD1 1191 aaKnown RBP7.42□□□□□ -1.22
CCDC171-207ENST00000478913 ZNF281Q9Y2X9 895 aa7.42□□□□□ -1.22
CCDC171-207ENST00000478913 C2orf71A6NGG8 1288 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 SEPHS1P49903 392 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 HK2P52789 917 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 ARHGEF4Q9NR80 690 aa7.41□□□□□ -1.22
CCDC171-207ENST00000478913 OAS3Q9Y6K5 1087 aaKnown RBP7.41□□□□□ -1.22
CCDC171-207ENST00000478913 TRAV20A0A0B4J274 112 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-207ENST00000478913 SNRPB2P08579 225 aaKnown RBP7.4□□□□□ -1.22
CCDC171-207ENST00000478913 HOXC12P31275 282 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 KCNJ6P48051 423 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 EEF1DP3Q658K8 133 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 MAP6Q96JE9 813 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 ERVK13-1Q9NX77 482 aa7.4□□□□□ -1.22
CCDC171-207ENST00000478913 IQGAP1P46940 1657 aa7.4□□□□□ -1.23
CCDC171-207ENST00000478913 ADGBQ8N7X0 1667 aa7.4□□□□□ -1.23
CCDC171-207ENST00000478913 IQGAP2Q13576 1575 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 GRIA2P42262 883 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 GGT6Q6P531 493 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 CYP2R1Q6VVX0 501 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 OXR1Q8N573 874 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 ANKS4BQ8N8V4 417 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
CCDC171-207ENST00000478913 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 CAMKK2Q96RR4 588 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 IER2Q9BTL4 223 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 G6PC3Q9BUM1 346 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 TNFRSF10DQ9UBN6 386 aa7.39□□□□□ -1.23
CCDC171-207ENST00000478913 TNRQ92752 1358 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 ADCY3O60266 1144 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 USP2O75604 605 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-207ENST00000478913 ZBTB7AO95365 584 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 CPP00450 1065 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 GDNFP39905 211 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 ECI1P42126 302 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 GFRA1P56159 465 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 CHRNEQ04844 493 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 C2orf27AQ580R0 203 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
CCDC171-207ENST00000478913 LILRB2Q8N423 598 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-207ENST00000478913 THAP3Q8WTV1 239 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms