RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 NKRFO15226 690 aaKnown RBP eCLIP26.59■■□□□ 1.859e-10■■■■■ 29
C9orf3-216ENST00000478603 STOX1Q6ZVD7 989 aa26.59■■□□□ 1.85
C9orf3-216ENST00000478603 CHST3Q7LGC8 479 aa26.59■■□□□ 1.85
C9orf3-216ENST00000478603 MCF2L2Q86YR7 1114 aa26.59■■□□□ 1.85
C9orf3-216ENST00000478603 PPP1R13LQ8WUF5 828 aa26.59■■□□□ 1.85
C9orf3-216ENST00000478603 CDX2Q99626 313 aaPredicted RBP26.59■■□□□ 1.85
C9orf3-216ENST00000478603 SEZ6LQ9BYH1 1024 aa26.59■■□□□ 1.85
C9orf3-216ENST00000478603 PALM3A6NDB9 673 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 E7EWF7 191 aa26.58■■□□□ 1.85
C9orf3-216ENST00000478603 IFIT3O14879 490 aaKnown RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 PPP1R11O60927 126 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 ZNF365Q70YC5 407 aa26.58■■□□□ 1.85
C9orf3-216ENST00000478603 NSUN6Q8TEA1 469 aaKnown RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 RMDN3Q96TC7 470 aa26.58■■□□□ 1.85
C9orf3-216ENST00000478603 MTG1Q9BT17 334 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 ALDH8A1Q9H2A2 487 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 GPHNQ9NQX3 736 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-216ENST00000478603 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.57■■□□□ 1.84
C9orf3-216ENST00000478603 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.57■■□□□ 1.84
C9orf3-216ENST00000478603 CFBP00751 764 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 CCL23P55773 120 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 TTLL4Q14679 1199 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 SLC35G1Q2M3R5 365 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 SEPT14Q6ZU15 432 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 RALYLQ86SE5 291 aaKnown RBP26.57■■□□□ 1.84
C9orf3-216ENST00000478603 NOC4LQ9BVI4 516 aaKnown RBP26.57■■□□□ 1.84
C9orf3-216ENST00000478603 AMNQ9BXJ7 453 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 MAF1Q9H063 256 aa26.57■■□□□ 1.84
C9orf3-216ENST00000478603 TRMT13Q9NUP7 481 aaKnown RBP26.57■■□□□ 1.84
C9orf3-216ENST00000478603 OPLAHO14841 1288 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 EIF2AK2P19525 551 aaKnown RBP26.56■■□□□ 1.84
C9orf3-216ENST00000478603 GRM4Q14833 912 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 BRDTQ58F21 947 aaPredicted RBP26.56■■□□□ 1.84
C9orf3-216ENST00000478603 CCDC62Q6P9F0 684 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 NCOA7Q8NI08 942 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 MTMR8Q96EF0 704 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 IL23AQ9NPF7 189 aa26.56■■□□□ 1.84
C9orf3-216ENST00000478603 ERICH2A1L162 156 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 A6NJR5 290 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 GRXCR1A8MXD5 290 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 ZBTB5O15062 677 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 WTAPQ15007 396 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 LY6KQ17RY6 165 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 NBPF20Q3BBV1 942 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 ARHGEF16Q5VV41 709 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 PSRC1Q6PGN9 363 aaPredicted RBP26.55■■□□□ 1.84
C9orf3-216ENST00000478603 HOMER1Q86YM7 354 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 MYLIPQ8WY64 445 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 MAP4K1Q92918 833 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 WNT8AQ9H1J5 351 aa26.55■■□□□ 1.84
C9orf3-216ENST00000478603 CYP2C9P11712 490 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 DNAJB2P25686 324 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 STXBP2Q15833 593 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 FAM47CQ5HY64 1035 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 RASIP1Q5U651 963 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 IWS1Q96ST2 819 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 PCDHA1Q9Y5I3 950 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 RBM8AQ9Y5S9 174 aaKnown RBP26.54■■□□□ 1.84
C9orf3-216ENST00000478603 CDH23Q9H251 3354 aa26.54■■□□□ 1.84
C9orf3-216ENST00000478603 MYH7BA7E2Y1 1941 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 HSD17B4P51659 736 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 ANTXR2P58335 489 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 SCLYQ96I15 445 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 PIGSQ96S52 555 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 PXMP2Q9NR77 195 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 SCN5AQ14524 2016 aa26.53■■□□□ 1.84
C9orf3-216ENST00000478603 TMEM67Q5HYA8 995 aa26.52■■□□□ 1.84
C9orf3-216ENST00000478603 MB21D2Q8IYB1 491 aaPredicted RBP26.52■■□□□ 1.84
C9orf3-216ENST00000478603 AFG1LQ8WV93 481 aa26.52■■□□□ 1.84
C9orf3-216ENST00000478603 GBF1Q92538 1859 aa26.52■■□□□ 1.84
C9orf3-216ENST00000478603 RIOX1Q9H6W3 641 aa26.52■■□□□ 1.84
C9orf3-216ENST00000478603 CXXC1Q9P0U4 656 aaPredicted RBP26.52■■□□□ 1.84
C9orf3-216ENST00000478603 TMEM265A0A087WTH1 108 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 CYTH3O43739 400 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 KPNA6O60684 536 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 GH1P01241 217 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 FGBP02675 491 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 NR3C2P08235 984 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 HOXA13P31271 388 aaPredicted RBP26.51■■□□□ 1.83
C9orf3-216ENST00000478603 PBX2P40425 430 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 CHMP4BP1P59074 171 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 ARHGAP1Q07960 439 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 TROAPQ12815 778 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 SART3Q15020 963 aaKnown RBP26.51■■□□□ 1.83
C9orf3-216ENST00000478603 HERVK_113Q902F9 699 aa26.51■■□□□ 1.83
C9orf3-216ENST00000478603 MMP3P08254 477 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 SUPT20HL2P0C7V6 817 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 GHRHRQ02643 423 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 OTOP2Q7RTS6 562 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 IGDCC4Q8TDY8 1250 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 TIFAQ96CG3 184 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 PBX4Q9BYU1 374 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 MYO9BQ13459 2157 aa26.5■■□□□ 1.83
C9orf3-216ENST00000478603 DLL1O00548 723 aa26.49■■□□□ 1.83
C9orf3-216ENST00000478603 EIF3JO75822 258 aaKnown RBP26.49■■□□□ 1.83
C9orf3-216ENST00000478603 GRIN2CQ14957 1233 aa26.49■■□□□ 1.83
C9orf3-216ENST00000478603 NFRKBQ6P4R8 1299 aa26.49■■□□□ 1.83
C9orf3-216ENST00000478603 CATIPQ7Z7H3 387 aa26.49■■□□□ 1.83
C9orf3-216ENST00000478603 SKAP1Q86WV1 359 aa26.49■■□□□ 1.83
C9orf3-216ENST00000478603 PIBF1Q8WXW3 757 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms