RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 ERCC5P28715 1186 aaPredicted RBP7.61□□□□□ -1.19
SYCP3-205ENST00000478238 PRRT2Q7Z6L0 340 aaPredicted RBP7.61□□□□□ -1.19
SYCP3-205ENST00000478238 CPA5Q8WXQ8 436 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 COPS5Q92905 334 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 CCSER2Q9H7U1 834 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 CLEC1BQ9P126 229 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 STRIP2Q9ULQ0 834 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 EMC9Q9Y3B6 208 aa7.61□□□□□ -1.19
SYCP3-205ENST00000478238 PLS3P13797 630 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 SCRN1Q12765 414 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 RTP5Q14D33 572 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 MBLAC2Q68D91 279 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 POMZP3Q6PJE2 187 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 BVESQ8NE79 360 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 SMARCC2Q8TAQ2 1214 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 NOX5Q96PH1 765 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 APBA2Q99767 749 aa7.6□□□□□ -1.19
SYCP3-205ENST00000478238 PRICKLE3O43900 615 aaPredicted RBP7.59□□□□□ -1.19
SYCP3-205ENST00000478238 FUCA1P04066 466 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 RBM10P98175 930 aaKnown RBP7.59□□□□□ -1.19
SYCP3-205ENST00000478238 CACNB2Q08289 660 aaPredicted RBP7.59□□□□□ -1.19
SYCP3-205ENST00000478238 NT5DC1Q5TFE4 455 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 CRACR2BQ8N4Y2 399 aaPredicted RBP7.59□□□□□ -1.19
SYCP3-205ENST00000478238 MMP19Q99542 508 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 TINF2Q9BSI4 451 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 BDH2Q9BUT1 245 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 GPRC5CQ9NQ84 441 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 USP40Q9NVE5 1235 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 SIT1Q9Y3P8 196 aa7.59□□□□□ -1.19
SYCP3-205ENST00000478238 NTRK1P04629 796 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 NAT2P11245 290 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 ZNF143P52747 638 aaPredicted RBP7.58□□□□□ -1.2
SYCP3-205ENST00000478238 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 ZFYVE27Q5T4F4 411 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 CARFQ8N187 725 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 PLEKHO2Q8TD55 490 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 ANAPC16Q96DE5 110 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 INPP5FQ9Y2H2 1132 aa7.58□□□□□ -1.2
SYCP3-205ENST00000478238 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
SYCP3-205ENST00000478238 THBDP07204 575 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 NFKB2Q00653 900 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 PLP2Q04941 152 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 NCAPHQ15003 741 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 GTF2IRD2BQ6EKJ0 949 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 TRIM59Q8IWR1 403 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 DPF3Q92784 378 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 MARCH2Q9P0N8 246 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 JAG2Q9Y219 1238 aa7.57□□□□□ -1.2
SYCP3-205ENST00000478238 UBXN11Q5T124 520 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 DCP2Q8IU60 420 aaKnown RBP7.56□□□□□ -1.2
SYCP3-205ENST00000478238 PPP1R14AQ96A00 147 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 DDX11Q96FC9 970 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 LGR4Q9BXB1 951 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 CYP26B1Q9NR63 512 aa7.56□□□□□ -1.2
SYCP3-205ENST00000478238 SPATA6Q9NWH7 488 aaPredicted RBP7.56□□□□□ -1.2
SYCP3-205ENST00000478238 C8BP07358 591 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 ATF4P18848 351 aaPredicted RBP7.55□□□□□ -1.2
SYCP3-205ENST00000478238 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 INF2Q27J81 1249 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 DBX2Q6ZNG2 339 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 FERMT3Q86UX7 667 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 TEX2Q8IWB9 1127 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 ZBTB8AQ96BR9 441 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 NKX2-4Q9H2Z4 354 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 NTMQ9P121 344 aa7.55□□□□□ -1.2
SYCP3-205ENST00000478238 NOBOXO60393 691 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 ADRB1P08588 477 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 CYP2C8P10632 490 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
SYCP3-205ENST00000478238 EFEMP1Q12805 493 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 FRS2Q8WU20 508 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 CAPN10Q9HC96 672 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 BTG4Q9NY30 223 aa7.54□□□□□ -1.2
SYCP3-205ENST00000478238 SMAD4Q13485 552 aaKnown RBP7.53□□□□□ -1.2
SYCP3-205ENST00000478238 SPATS1Q496A3 300 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 TTLL7Q6ZT98 887 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 GORASP1Q9BQQ3 440 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 AP5M1Q9H0R1 490 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 DUSP10Q9Y6W6 482 aa7.53□□□□□ -1.2
SYCP3-205ENST00000478238 C22orf46C9J442 243 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 E9PSI1 815 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 SMAD7O15105 426 aaKnown RBP7.52□□□□□ -1.21
SYCP3-205ENST00000478238 SGSM2O43147 1006 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 GJA9P57773 515 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 C6orf15Q6UXA7 325 aaPredicted RBP7.52□□□□□ -1.21
SYCP3-205ENST00000478238 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 ZNF761Q86XN6 746 aaPredicted RBP7.52□□□□□ -1.21
SYCP3-205ENST00000478238 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
SYCP3-205ENST00000478238 LNPKQ9C0E8 428 aa7.52□□□□□ -1.21
SYCP3-205ENST00000478238 TBX1O43435 398 aa7.51□□□□□ -1.21
SYCP3-205ENST00000478238 SMARCA5O60264 1052 aaPredicted RBP7.51□□□□□ -1.21
SYCP3-205ENST00000478238 FGRP09769 529 aa7.51□□□□□ -1.21
SYCP3-205ENST00000478238 FPR2P25090 351 aa7.51□□□□□ -1.21
SYCP3-205ENST00000478238 CNR2P34972 360 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms