RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 SH2B2O14492 632 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 PSMC6P62333 389 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 FAAP100Q0VG06 881 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 C9orf50Q5SZB4 431 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 SGMS1Q86VZ5 419 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 NEK1Q96PY6 1258 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
SOX2-OT-208ENST00000477928 LAMA2P24043 3122 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 CCDC69A6NI79 296 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 ZBTB5O15062 677 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 CLTBP09497 229 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 HOXA13P31271 388 aaPredicted RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 HSPA4P34932 840 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 NKX3-2P78367 333 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 GHRHRQ02643 423 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 PDE4DQ08499 809 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 RASEFQ8IZ41 740 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 NUP133Q8WUM0 1156 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.16
SOX2-OT-208ENST00000477928 A0A1W2PPC1 479 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 CFBP00751 764 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 EIF2AK2P19525 551 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 CDK7P50613 346 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 RCAN1P53805 252 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 IQSEC1Q6DN90 963 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 Q7L0L9 218 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 ANKRD33Q7Z3H0 272 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 ZNF654Q8IZM8 581 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 SPZ1Q9BXG8 430 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 PRKAG2Q9UGJ0 569 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 Q9Y3F1 56 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 LTBP2Q14767 1821 aa16.01■□□□□ 0.15
SOX2-OT-208ENST00000477928 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
SOX2-OT-208ENST00000477928 PPP2R5BQ15173 497 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 SHHQ15465 462 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 FBXL16Q8N461 479 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
SOX2-OT-208ENST00000477928 IL31RAQ8NI17 732 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 AP5M1Q9H0R1 490 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 TMEM39AQ9NV64 488 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 TBX21Q9UL17 535 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 SLC12A7Q9Y666 1083 aa16■□□□□ 0.15
SOX2-OT-208ENST00000477928 UMODL1Q5DID0 1318 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 PNMA6FA0A0J9YX94 578 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 hCG_1642624A0A1W2PR95 340 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 ARVCFO00192 962 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 CPA1P15085 419 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 PSMA5P28066 241 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 HSD17B4P51659 736 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 EXOSC10Q01780 885 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 SEPT14Q6ZU15 432 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 IWS1Q96ST2 819 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 BAZ2BQ9UIF8 2168 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-208ENST00000477928 ELP1O95163 1332 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 SORBS3O60504 671 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 LY6KQ17RY6 165 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 LRIT3Q3SXY7 679 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 SRBD1Q8N5C6 995 aaKnown RBP15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 RBM28Q9NW13 759 aaKnown RBP15.98■□□□□ 0.15
SOX2-OT-208ENST00000477928 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 RGS20O76081 388 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 MYL3P08590 195 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 RAG1P15918 1043 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 ITGA7Q13683 1181 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 SLC43A3Q8NBI5 491 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
SOX2-OT-208ENST00000477928 TOX2Q96NM4 488 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms