RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MEIS3P2A8K0S8 358 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 ZNF623O75123 536 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 EPHB4P54760 987 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 EAPPQ56P03 285 aaPredicted RBP5.04□□□□□ -1.6
XRN1-211ENST00000477237 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 ETV3LQ6ZN32 361 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 GULP1Q9UBP9 304 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 FHOD1Q9Y613 1164 aa5.04□□□□□ -1.6
XRN1-211ENST00000477237 PPP2CBP62714 309 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 PPP2CAP67775 309 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 PURAQ00577 322 aaKnown RBP5.03□□□□□ -1.6
XRN1-211ENST00000477237 FOXE3Q13461 319 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 AXDND1Q5T1B0 1012 aaPredicted RBP5.03□□□□□ -1.6
XRN1-211ENST00000477237 PPFIBP1Q86W92 1011 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 DHRS1Q96LJ7 313 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 CEP89Q96ST8 783 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 COPRSQ9NQ92 184 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 SUPT16HQ9Y5B9 1047 aaKnown RBP5.03□□□□□ -1.6
XRN1-211ENST00000477237 IVNS1ABPQ9Y6Y0 642 aa5.03□□□□□ -1.6
XRN1-211ENST00000477237 NTRK1P04629 796 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 ZNF28P17035 718 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 PMS1P54277 932 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 NANOS3P60323 173 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 POU4F1Q01851 419 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 LRRFIP1Q32MZ4 808 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 SEZ6Q53EL9 994 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 RCSD1Q6JBY9 416 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 ARHGEF18Q6ZSZ5 1173 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 TMC4Q7Z404 712 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 REXO1Q8N1G1 1221 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 Q8TCH9 128 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 ZDHHC15Q96MV8 337 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 MCMBPQ9BTE3 642 aa5.02□□□□□ -1.61
XRN1-211ENST00000477237 NOL6Q9H6R4 1146 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 SF3B6Q9Y3B4 125 aaKnown RBP5.02□□□□□ -1.61
XRN1-211ENST00000477237 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
XRN1-211ENST00000477237 CD247P20963 164 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 EIF4A3P38919 411 aaKnown RBP5.01□□□□□ -1.61
XRN1-211ENST00000477237 MIIPQ5JXC2 388 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 PRAMEF18Q5VWM3 479 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 MIB1Q86YT6 1006 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 ZNF451Q9Y4E5 1061 aa5.01□□□□□ -1.61
XRN1-211ENST00000477237 SUPT5HO00267 1087 aaKnown RBP5□□□□□ -1.61
XRN1-211ENST00000477237 ABHD18Q0P651 414 aa5□□□□□ -1.61
XRN1-211ENST00000477237 ADAM9Q13443 819 aa5□□□□□ -1.61
XRN1-211ENST00000477237 EEF1DP3Q658K8 133 aa5□□□□□ -1.61
XRN1-211ENST00000477237 SLFN13Q68D06 897 aa5□□□□□ -1.61
XRN1-211ENST00000477237 CPNE8Q86YQ8 564 aa5□□□□□ -1.61
XRN1-211ENST00000477237 KBTBD2Q8IY47 623 aa5□□□□□ -1.61
XRN1-211ENST00000477237 ZNF503Q96F45 646 aa5□□□□□ -1.61
XRN1-211ENST00000477237 YTHDC1Q96MU7 727 aaKnown RBP5□□□□□ -1.61
XRN1-211ENST00000477237 MEGF9Q9H1U4 602 aa5□□□□□ -1.61
XRN1-211ENST00000477237 UBP1Q9NZI7 540 aa5□□□□□ -1.61
XRN1-211ENST00000477237 TP53P04637 393 aaPredicted RBP4.99□□□□□ -1.61
XRN1-211ENST00000477237 MCM4P33991 863 aa4.99□□□□□ -1.61
XRN1-211ENST00000477237 DPTQ07507 201 aa4.99□□□□□ -1.61
XRN1-211ENST00000477237 INTS3Q68E01 1043 aaKnown RBP4.99□□□□□ -1.61
XRN1-211ENST00000477237 RNF207Q6ZRF8 634 aa4.99□□□□□ -1.61
XRN1-211ENST00000477237 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
XRN1-211ENST00000477237 ZNF296Q8WUU4 475 aaPredicted RBP4.99□□□□□ -1.61
XRN1-211ENST00000477237 SMARCC1Q92922 1105 aaPredicted RBP4.99□□□□□ -1.61
XRN1-211ENST00000477237 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
XRN1-211ENST00000477237 AURKAO14965 403 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 SGSM2O43147 1006 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 B4GALT4O60513 344 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 ZNF202O95125 648 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 FUCA1P04066 466 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 IL13P35225 146 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 XPCQ01831 940 aaPredicted RBP4.98□□□□□ -1.61
XRN1-211ENST00000477237 PPP2R5DQ14738 602 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 ZC3H18Q86VM9 953 aaKnown RBP4.98□□□□□ -1.61
XRN1-211ENST00000477237 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 TRIM8Q9BZR9 551 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 TMEM168Q9H0V1 697 aa4.98□□□□□ -1.61
XRN1-211ENST00000477237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.98□□□□□ -1.61
XRN1-211ENST00000477237 ANKRD33BA6NCL7 494 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 STXBP3O00186 592 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 NARSO43776 548 aaKnown RBP4.97□□□□□ -1.61
XRN1-211ENST00000477237 ITGA4P13612 1032 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 STAT5AP42229 794 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 ZNF165P49910 485 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 MLLT6P55198 1093 aaPredicted RBP4.97□□□□□ -1.61
XRN1-211ENST00000477237 DCP2Q8IU60 420 aaKnown RBP4.97□□□□□ -1.61
XRN1-211ENST00000477237 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 L2HGDHQ9H9P8 463 aa4.97□□□□□ -1.61
XRN1-211ENST00000477237 ZFR2Q9UPR6 939 aaKnown RBP4.97□□□□□ -1.61
XRN1-211ENST00000477237 C7orf72A4D263 438 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 CR1LQ2VPA4 569 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 NRN1LQ496H8 165 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 DNAJC10Q8IXB1 793 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 ZSWIM3Q96MP5 696 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 ADAMTS1Q9UHI8 967 aa4.96□□□□□ -1.62
XRN1-211ENST00000477237 A0A087WZG4 1122 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms