RNA–Protein interactions for RNA: ENST00000477193.1

SRSF4-203, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 206 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-203ENST00000477193 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
SRSF4-203ENST00000477193 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
SRSF4-203ENST00000477193 TMEM82A0PJX8 343 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 GNAT3A8MTJ3 354 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 WNT9AO14904 365 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 PYGMP11217 842 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 ATP2A2P16615 1042 aaKnown RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 NAT1P18440 290 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 SCNN1BP51168 640 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 PAK1Q13153 545 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 EEF1DP3Q658K8 133 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 CPNE8Q86YQ8 564 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 KSR1Q8IVT5 923 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 WDR75Q8IWA0 830 aaKnown RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 SPACA3Q8IXA5 215 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 CBARPQ8N350 705 aaPredicted RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 FBXL6Q8N531 539 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 LINC00116Q8NCU8 138 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 HOOK2Q96ED9 719 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 MFSD14AQ96MC6 490 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 GPR101Q96P66 508 aaPredicted RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 SPTLC3Q9NUV7 552 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 ZIM2Q9NZV7 527 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 H2AFY2Q9P0M6 372 aaPredicted RBP4.8□□□□□ -1.64
SRSF4-203ENST00000477193 B4GALT6Q9UBX8 382 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 TCFL5Q9UL49 500 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 PLAGL2Q9UPG8 496 aa4.8□□□□□ -1.64
SRSF4-203ENST00000477193 FAM155AB1AL88 458 aaPredicted RBP4.79□□□□□ -1.64
SRSF4-203ENST00000477193 H3BS24 57 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 FKTNO75072 461 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 SOD2P04179 222 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 TPP2P29144 1249 aaPredicted RBP4.79□□□□□ -1.64
SRSF4-203ENST00000477193 LSSP48449 732 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 IL2P60568 153 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CYP27C1Q4G0S4 372 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 SYDE2Q5VT97 1194 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CD163Q86VB7 1156 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 NLRP10Q86W26 655 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CISD2Q8N5K1 135 aaKnown RBP4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CHST14Q8NCH0 376 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 SCARF2Q96GP6 870 aaPredicted RBP4.79□□□□□ -1.64
SRSF4-203ENST00000477193 HSPA12BQ96MM6 686 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 PTCHD1Q96NR3 888 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CDH19Q9H159 772 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 EMC7Q9NPA0 242 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 SEMA3GQ9NS98 782 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 GPATCH2Q9NW75 528 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 ZSWIM5Q9P217 1185 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 CBLCQ9ULV8 474 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 RAXQ9Y2V3 346 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 PCDHA2Q9Y5H9 948 aa4.79□□□□□ -1.64
SRSF4-203ENST00000477193 NPHP3-ACAD11A0A0J9YXS1 232 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 CCDC66A2RUB6 948 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 FZD9O00144 591 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PRPF3O43395 683 aaKnown RBP4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PRC1O43663 620 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PAMP19021 973 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 DNM2P50570 870 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PCBP3P57721 371 aaKnown RBP4.78□□□□□ -1.64
SRSF4-203ENST00000477193 ERVK-21P61565 698 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PIN1Q13526 163 aaPredicted RBP4.78□□□□□ -1.64
SRSF4-203ENST00000477193 KIZQ2M2Z5 673 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 ABCB5Q2M3G0 1257 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 INAVAQ3KP66 663 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 ATP13A4Q4VNC1 1196 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 FSTL4Q6MZW2 842 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 C14orf80Q86SX3 495 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 DPF3Q92784 378 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 UBE2FQ969M7 185 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 ALG1Q9BT22 464 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 TRIT1Q9H3H1 467 aaKnown RBP4.78□□□□□ -1.64
SRSF4-203ENST00000477193 AASDHPPTQ9NRN7 309 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PCDHA11Q9Y5I1 949 aa4.78□□□□□ -1.64
SRSF4-203ENST00000477193 WRNQ14191 1432 aaPredicted RBP eCLIP4.78□□□□□ -1.64
SRSF4-203ENST00000477193 PTPDC1A2A3K4 754 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 C7orf72A4D263 438 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 C1QTNF9BB2RNN3 333 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 K7ESF4 209 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 TGM5O43548 720 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 GAS7O60861 476 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 ABLIM3O94929 683 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 FBXO21O94952 628 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 ESR1P03372 595 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 CEACAM5P06731 702 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 GRK2P25098 689 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 GRK3P35626 688 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 BCL6P41182 706 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 IARSP41252 1262 aaKnown RBP4.77□□□□□ -1.65
SRSF4-203ENST00000477193 TEKQ02763 1124 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 LAPTM5Q13571 262 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 RNF43Q68DV7 783 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 IQCEQ6IPM2 695 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 C16orf59Q7L2K0 433 aa4.77□□□□□ -1.65
SRSF4-203ENST00000477193 OTOP1Q7RTM1 612 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms