RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KCNQ3O43525 872 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 CELF2O95319 508 aaKnown RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 MYL6BP14649 208 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 FOSL1P15407 271 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 GPTP24298 496 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 ASPAP45381 313 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 PIP4K2AP48426 406 aaPredicted RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 CDK8P49336 464 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 MMP14P50281 582 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 ATP2B2Q01814 1243 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 CALD1Q05682 793 aaKnown RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 GRAPQ13588 217 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 CNGB1Q14028 1251 aaPredicted RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 MRPL58Q14197 206 aaKnown RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 RALBP1Q15311 655 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 HLFQ16534 295 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 SLC10A5Q5PT55 438 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 PCNX4Q63HM2 1172 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 SAPCD2Q86UD0 394 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 WFDC3Q8IUB2 231 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 SP8Q8IXZ3 490 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 ZNF34Q8IZ26 560 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 GRAPLQ8TC17 118 aaPredicted RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 DPF2Q92785 391 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 FRMD6Q96NE9 622 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 ZFYVE1Q9HBF4 777 aa4.52□□□□□ -1.69
XRN1-209ENST00000472625 RRP7AQ9Y3A4 280 aaKnown RBP4.52□□□□□ -1.69
XRN1-209ENST00000472625 KDM3BQ7LBC6 1761 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 PRAMEF22A3QJZ6 481 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 CYP26A1O43174 497 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 EIF4BP23588 611 aaKnown RBP4.51□□□□□ -1.69
XRN1-209ENST00000472625 GMPSP49915 693 aaPredicted RBP4.51□□□□□ -1.69
XRN1-209ENST00000472625 FKBP1BP68106 108 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 GRM1Q13255 1194 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 CDK5R2Q13319 367 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 DCTN1Q14203 1278 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 INPP5AQ14642 412 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 AOC3Q16853 763 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 SUSD4Q5VX71 490 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 NGEFQ8N5V2 710 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 GIMAP7Q8NHV1 300 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 DCPSQ96C86 337 aaKnown RBP4.51□□□□□ -1.69
XRN1-209ENST00000472625 YIPF2Q9BWQ6 316 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 CCDC39Q9UFE4 941 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 PGAP2Q9UHJ9 254 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 ADGRE2Q9UHX3 823 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 TRMT112Q9UI30 125 aaKnown RBP4.51□□□□□ -1.69
XRN1-209ENST00000472625 ANGEL1Q9UNK9 670 aaKnown RBP4.51□□□□□ -1.69
XRN1-209ENST00000472625 PCDHB5Q9Y5E4 795 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 ZNF609O15014 1411 aa4.51□□□□□ -1.69
XRN1-209ENST00000472625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 CCDC85CA6NKD9 419 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 EIF4EBP3O60516 100 aaPredicted RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 DDX58O95786 925 aaKnown RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 EPS15P42566 896 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 HUNKP57058 714 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 RIPK4P57078 832 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 ID3Q02535 119 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 PPP2R3AQ06190 1150 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 CXCL9Q07325 125 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 TCIRG1Q13488 830 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 TTLL4Q14679 1199 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
XRN1-209ENST00000472625 CYP4F22Q6NT55 531 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 OLFM4Q6UX06 510 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 ZNF574Q6ZN55 896 aaPredicted RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 TTLL7Q6ZT98 887 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 SV2BQ7L1I2 683 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 NLRP10Q86W26 655 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 C2orf69Q8N8R5 385 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 PLEKHF1Q96S99 279 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 HYPKQ9NX55 129 aa4.5□□□□□ -1.69
XRN1-209ENST00000472625 DBF4Q9UBU7 674 aaPredicted RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 ZC3H7BQ9UGR2 993 aaKnown RBP4.5□□□□□ -1.69
XRN1-209ENST00000472625 MYO3BQ8WXR4 1341 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 MYBBP1AQ9BQG0 1328 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 PITPNM2Q9BZ72 1349 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 TCERG1O14776 1098 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 PAX4O43316 350 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 ERCC3P19447 782 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 EIF2S2P20042 333 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 NF2P35240 595 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 RGS19P49795 217 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 ST13P50502 369 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 ERVK-24P63145 666 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 MAP7Q14244 749 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 SF3B3Q15393 1217 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 PKN2Q16513 984 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 CCDC152Q4G0S7 254 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 CST9Q5W186 159 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 RGMBQ6NW40 437 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 LRFN4Q6PJG9 635 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 FAM214BQ7L5A3 538 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 KRT26Q7Z3Y9 468 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 TP53INP2Q8IXH6 220 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 FLCNQ8NFG4 579 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms