RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 LY6KQ17RY6 165 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 USP38Q8NB14 1042 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.895e-19■□□□□ 8.5
USP48-207ENST00000471752 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 NOC4LQ9BVI4 516 aaKnown RBP9.47□□□□□ -0.89
USP48-207ENST00000471752 AP5M1Q9H0R1 490 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 VTA1Q9NP79 307 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 PRDM6Q9NQX0 595 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 MAD2L2Q9UI95 211 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 TELO2Q9Y4R8 837 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 TNKSO95271 1327 aa9.47□□□□□ -0.89
USP48-207ENST00000471752 RGS20O76081 388 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 RABGGTBP53611 331 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 SMAD3P84022 425 aaKnown RBP9.46□□□□□ -0.9
USP48-207ENST00000471752 PURAQ00577 322 aaKnown RBP9.46□□□□□ -0.9
USP48-207ENST00000471752 AAMPQ13685 434 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 HIC1Q14526 733 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 GPNMBQ14956 572 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 TCTN1Q2MV58 587 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 CCDC62Q6P9F0 684 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 SEPT14Q6ZU15 432 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 TICAM2Q86XR7 235 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 IL31RAQ8NI17 732 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 CTAGE1Q96RT6 745 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 PBX4Q9BYU1 374 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
USP48-207ENST00000471752 KAT14Q9H8E8 782 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 SPC25Q9HBM1 224 aa9.46□□□□□ -0.9
USP48-207ENST00000471752 YBX2Q9Y2T7 364 aaKnown RBP9.46□□□□□ -0.9
USP48-207ENST00000471752 CYTH3O43739 400 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 HOXA13P31271 388 aaPredicted RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 CHMP4BP1P59074 171 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 SP2Q02086 613 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 PDE4DQ08499 809 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 TTLL4Q14679 1199 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 IMMTQ16891 758 aaKnown RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 OR6J1Q8NGC5 347 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 KAT2BQ92831 832 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 PIGSQ96S52 555 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 HIPK3Q9H422 1215 aa9.45□□□□□ -0.9
USP48-207ENST00000471752 RNF41Q9H4P4 317 aaPredicted RBP9.45□□□□□ -0.9
USP48-207ENST00000471752 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 A6NJR5 290 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 KLRF2D3W0D1 207 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 E7EWF7 191 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 ARHGEF15O94989 841 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 PARP1P09874 1014 aaKnown RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 DNAJB2P25686 324 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 ZNF200P98182 395 aaPredicted RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 ARHGAP1Q07960 439 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 GPATCH4Q5T3I0 446 aaKnown RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 TMCO2Q7Z6W1 182 aaPredicted RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 RGS22Q8NE09 1264 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 WNT8BQ93098 351 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 MTMR8Q96EF0 704 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 IL23AQ9NPF7 189 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 ADD3Q9UEY8 706 aaKnown RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 Q9Y3F1 56 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 LRRC37A2A6NM11 1700 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 MYO9BQ13459 2157 aa9.44□□□□□ -0.9
USP48-207ENST00000471752 BAZ2BQ9UIF8 2168 aaKnown RBP9.44□□□□□ -0.9
USP48-207ENST00000471752 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 RFXAPO00287 272 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 SGSM2O43147 1006 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 DHX16O60231 1041 aaKnown RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 CFBP00751 764 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 FGBP02675 491 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 PCP11498 1178 aaKnown RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■□□ 15.2
USP48-207ENST00000471752 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 DEFB128Q7Z7B8 93 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 CMTR1Q8N1G2 835 aaKnown RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 MAFAQ8NHW3 353 aaPredicted RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 DHX38Q92620 1227 aaKnown RBP9.43□□□□□ -0.9
USP48-207ENST00000471752 RMDN3Q96TC7 470 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 OSBPL7Q9BZF2 842 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
USP48-207ENST00000471752 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms