RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TMOD1P28289 359 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 TRPC1P48995 793 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 ADKP55263 362 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 Q3C1V9 767 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 COPS6Q7L5N1 327 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 HDDC2Q7Z4H3 204 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 ZBTB33Q86T24 672 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 USP26Q9BXU7 913 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 FGFR1OP2Q9NVK5 253 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SLC12A6Q9UHW9 1150 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 ATP11BQ9Y2G3 1177 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 PPRC1Q5VV67 1664 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 IRS4O14654 1257 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 GAS7O60861 476 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 WDR47O94967 919 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 IMPDH2P12268 514 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SLC1A4P43007 532 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 MECOMQ03112 1051 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 AARS2Q5JTZ9 985 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 GADL1Q6ZQY3 521 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 GPBP1Q86WP2 473 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 IQCDQ96DY2 449 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 KLC2Q9H0B6 622 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 HPS4Q9NQG7 708 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 RTCBQ9Y3I0 505 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SBNO1A3KN83 1393 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 A0A1B0GW55 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 RANBP1P43487 201 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 RNASELQ05823 741 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 C8orf37Q96NL8 207 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SH3GL2Q99962 352 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DIABLOQ9NR28 239 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 PCDHB4Q9Y5E5 795 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 XRCC5P13010 732 aaKnown RBP7.46□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF75DP51815 510 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 SLC39A6Q13433 755 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 XKR9Q5GH70 373 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 KRT28Q7Z3Y7 464 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 TTC25Q96NG3 672 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 LRRC37BQ96QE4 947 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 MIS12Q9H081 205 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF711Q9Y462 761 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 PRPF4O43172 522 aaKnown RBP eCLIP7.46□□□□□ -1.215e-17■■■■■ 29.7
BRCA1-210ENST00000471181 GNA14O95837 355 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 HSPA1AP0DMV8 641 aaKnown RBP7.46□□□□□ -1.21
BRCA1-210ENST00000471181 HSPA1BP0DMV9 641 aaKnown RBP7.46□□□□□ -1.21
BRCA1-210ENST00000471181 IMPG1Q17R60 797 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 DARS2Q6PI48 645 aaKnown RBP7.46□□□□□ -1.21
BRCA1-210ENST00000471181 PCGF5Q86SE9 256 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 GCNAQ96QF7 691 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 TSC22D3Q99576 134 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 SPZ1Q9BXG8 430 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 EDEM3Q9BZQ6 932 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF212Q9UDV6 495 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 PHF8Q9UPP1 1060 aa7.46□□□□□ -1.21
BRCA1-210ENST00000471181 KDM5BQ9UGL1 1544 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 KRT87PA6NCN2 255 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 HSPA6P17066 643 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PDE1AP54750 535 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 MXD4Q14582 209 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-210ENST00000471181 KLC3Q6P597 504 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PPM1KQ8N3J5 372 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 ENAHQ8N8S7 591 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-210ENST00000471181 SNX25Q9H3E2 840 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 TBK1Q9UHD2 729 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 DENND2AQ9ULE3 1009 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 SNX2O60749 519 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 ARIH2O95376 493 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PLS3P13797 630 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 NSFP46459 744 aaKnown RBP7.46□□□□□ -1.22
BRCA1-210ENST00000471181 CENPAP49450 140 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 GOLGA8DPQ0D2H9 430 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 C16orf72Q14CZ0 275 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 POSTNQ15063 836 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 DEPDC1Q5TB30 811 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 CYP4F22Q6NT55 531 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 KRT25Q7Z3Z0 450 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 NOSTRINQ8IVI9 506 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 ZFP42Q96MM3 310 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 SUN2Q9UH99 717 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 ABCC11Q96J66 1382 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 RAD50Q92878 1312 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PI4K2BG5E9Z4 385 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 PJA2O43164 708 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 SPAG7O75391 227 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 MT-ND3P03897 115 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 GSNP06396 782 aa7.46□□□□□ -1.22
BRCA1-210ENST00000471181 BASP1P80723 227 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms