RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PNMA2Q9UL42 364 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 NSUN2Q08J23 767 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 ADAM9Q13443 819 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 GLE1Q53GS7 698 aaKnown RBP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 BBOF1Q8ND07 529 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 CLIC6Q96NY7 704 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 LRRN2O75325 713 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 SCNN1DP51172 638 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PPARAQ07869 468 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 KLHL29Q96CT2 875 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 THOC1Q96FV9 657 aaKnown RBP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PYGLP06737 847 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 PTPREP23469 700 aa12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
SLC44A1-205ENST00000470972 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 RAPGEF5Q92565 580 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 FAM149B1Q96BN6 582 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MAPK4P31152 587 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 CCDC85BQ15834 202 aaPredicted RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 GRAMD1BQ3KR37 738 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MRFAP1Q9Y605 127 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MCF2LO15068 1137 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 SGO2Q562F6 1265 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 KRT1P04264 644 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 BASP1P80723 227 aaKnown RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 CAPRIN1Q14444 709 aaKnown RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 ATG16L1Q676U5 607 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 PRXQ9BXM0 1461 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 SLFN12Q8IYM2 578 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 BLIDQ8IZY5 108 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 VAMP4O75379 141 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 OCRLQ01968 901 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 EXOC3L4Q17RC7 722 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MOCS3O95396 460 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 OCM2P0CE71 109 aa12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
SLC44A1-205ENST00000470972 MIS12Q9H081 205 aa12.4□□□□□ -0.43
SLC44A1-205ENST00000470972 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 PLBD2Q8NHP8 589 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 ATP6V0A1Q93050 837 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 JPH2Q9BR39 696 aaPredicted RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 SMYD3Q9H7B4 428 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 FANCLQ9NW38 375 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 TLK1Q9UKI8 766 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 IQCDQ96DY2 449 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 PLTPP55058 493 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 DYDC2Q96IM9 177 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 UBXN2AP68543 259 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 HDLBPQ00341 1268 aaKnown RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 CENPKQ9BS16 269 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 TSR3Q9UJK0 312 aaKnown RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
SLC44A1-205ENST00000470972 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 KCNA1Q09470 495 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 GRAMD4Q6IC98 578 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 ANGPTL2Q9UKU9 493 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 MT-ND3P03897 115 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 OR52Z1P0C646 297 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 GTF2IP78347 998 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 COG4Q9H9E3 785 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 KIF17Q9P2E2 1029 aa12.38□□□□□ -0.43
SLC44A1-205ENST00000470972 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms