RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 NFE2L2Q16236 605 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 FBLN7Q53RD9 439 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 BICRALQ6AI39 1079 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 KCNT2Q6UVM3 1135 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 TEX2Q8IWB9 1127 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
SSB-209ENST00000470621 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 NPFFR2Q9Y5X5 522 aa8.33□□□□□ -1.08
SSB-209ENST00000470621 MYOCOSA0A1B0GUC4 107 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 FUCA1P04066 466 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 LTBRP36941 435 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 RPTNQ6XPR3 784 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 LZTR1Q8N653 840 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 PLEKHO2Q8TD55 490 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 CDC6Q99741 560 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 ZNF552Q9H707 407 aaPredicted RBP8.32□□□□□ -1.08
SSB-209ENST00000470621 KLHL14Q9P2G3 628 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 PCDHA2Q9Y5H9 948 aa8.32□□□□□ -1.08
SSB-209ENST00000470621 ASXL2Q76L83 1435 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 TRBV23-1A0A0A0MS06 115 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 GLI4P10075 376 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 BCL6P41182 706 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 RAB3GAP1Q15042 981 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 PKN1Q16512 942 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 IQCEQ6IPM2 695 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 MRFAP1L1Q96HT8 127 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 MCOLN1Q9GZU1 580 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 PLA2G2DQ9UNK4 145 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 PTCH2Q9Y6C5 1203 aa8.31□□□□□ -1.08
SSB-209ENST00000470621 A0A1W2PQJ5 194 aa8.3□□□□□ -1.08
SSB-209ENST00000470621 SRGAP3O43295 1099 aa8.3□□□□□ -1.08
SSB-209ENST00000470621 C6orf222P0C671 652 aaPredicted RBP8.3□□□□□ -1.08
SSB-209ENST00000470621 C2orf27AQ580R0 203 aa8.3□□□□□ -1.08
SSB-209ENST00000470621 KRTAP4-2Q9BYR5 136 aa8.3□□□□□ -1.08
SSB-209ENST00000470621 PPARGC1AQ9UBK2 798 aaKnown RBP8.3□□□□□ -1.08
SSB-209ENST00000470621 TRAF6Q9Y4K3 522 aa8.3□□□□□ -1.08
SSB-209ENST00000470621 TIMM13Q9Y5L4 95 aaPredicted RBP8.3□□□□□ -1.08
SSB-209ENST00000470621 ZC3H12DA2A288 527 aaKnown RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 MPOP05164 745 aa8.29□□□□□ -1.08
SSB-209ENST00000470621 VIPR1P32241 457 aa8.29□□□□□ -1.08
SSB-209ENST00000470621 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 PLEKHN1Q494U1 663 aaPredicted RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 SCUBE1Q8IWY4 988 aa8.29□□□□□ -1.08
SSB-209ENST00000470621 FBXO15Q8NCQ5 510 aaPredicted RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 THAP3Q8WTV1 239 aaPredicted RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 KISS1RQ969F8 398 aaPredicted RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSB-209ENST00000470621 MRPS23Q9Y3D9 190 aaKnown RBP8.29□□□□□ -1.08
SSB-209ENST00000470621 SIT1Q9Y3P8 196 aa8.29□□□□□ -1.08
SSB-209ENST00000470621 IGSF3O75054 1194 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 NTRK1P04629 796 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 YBX1P67809 324 aaKnown RBP8.28□□□□□ -1.08
SSB-209ENST00000470621 WWC2Q6AWC2 1192 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 CEP68Q76N32 757 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 Q8N1Y9 231 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 USP33Q8TEY7 942 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 SH3TC2Q8TF17 1288 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 SGPP1Q9BX95 441 aa8.28□□□□□ -1.08
SSB-209ENST00000470621 C22orf46C9J442 243 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 CYBBP04839 570 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 SUMO1P63165 101 aaKnown RBP8.27□□□□□ -1.09
SSB-209ENST00000470621 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 LONRF2Q1L5Z9 754 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 STYK1Q6J9G0 422 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 CDIP1Q9H305 208 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 GPR27Q9NS67 375 aa8.27□□□□□ -1.09
SSB-209ENST00000470621 F8W031 263 aaPredicted RBP8.26□□□□□ -1.09
SSB-209ENST00000470621 MYO1BO43795 1136 aa8.26□□□□□ -1.09
SSB-209ENST00000470621 KRT1P04264 644 aa8.26□□□□□ -1.09
SSB-209ENST00000470621 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
SSB-209ENST00000470621 LSAMPQ13449 338 aa8.26□□□□□ -1.09
SSB-209ENST00000470621 CBX2Q14781 532 aaPredicted RBP8.26□□□□□ -1.09
SSB-209ENST00000470621 SYDE1Q6ZW31 735 aaPredicted RBP8.26□□□□□ -1.09
SSB-209ENST00000470621 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
SSB-209ENST00000470621 BCAS3Q9H6U6 928 aa8.26□□□□□ -1.09
SSB-209ENST00000470621 MBD1Q9UIS9 605 aaPredicted RBP8.26□□□□□ -1.09
SSB-209ENST00000470621 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 RSPO2Q6UXX9 243 aaPredicted RBP8.25□□□□□ -1.09
SSB-209ENST00000470621 CABP7Q86V35 215 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 TRMT2BQ96GJ1 504 aaKnown RBP8.25□□□□□ -1.09
SSB-209ENST00000470621 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 FAM84AQ96KN4 292 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 GCM1Q9NP62 436 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 CLDND1Q9NY35 253 aa8.25□□□□□ -1.09
SSB-209ENST00000470621 HRKO00198 91 aa8.24□□□□□ -1.09
SSB-209ENST00000470621 PEX10O60683 326 aa8.24□□□□□ -1.09
SSB-209ENST00000470621 GTF2A2P52657 109 aa8.24□□□□□ -1.09
SSB-209ENST00000470621 EPHB3P54753 998 aa8.24□□□□□ -1.09
SSB-209ENST00000470621 PRR5P85299 388 aa8.24□□□□□ -1.09
SSB-209ENST00000470621 ZNF200P98182 395 aaPredicted RBP8.24□□□□□ -1.09
SSB-209ENST00000470621 NR1I3Q14994 352 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms