RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 LRRC15Q8TF66 581 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 NUP88Q99567 741 aaPredicted RBP19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 GINM1Q9NU53 330 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 PGAP2Q9UHJ9 254 aa19.02■□□□□ 0.64
SMARCD3-206ENST00000470588 LRRC10BA6NIK2 292 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L15C9J2P7 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L13C9JLJ4 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L11C9JVI0 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L18D6R9N7 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L22D6RA61 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L17D6RBQ6 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L19D6RCP7 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L20D6RJB6 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 SLC26A4O43511 780 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 ASNSP08243 561 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 PPP1R2P41236 205 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L24Q0WX57 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 GRB10Q13322 594 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 KRT79Q5XKE5 535 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 USP17L6PQ6QN14 398 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 SV2BQ7L1I2 683 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 APTXQ7Z2E3 356 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 GIMAP8Q8ND71 665 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 TRIM9Q9C026 710 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 DEFB129Q9H1M3 183 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 TMX1Q9H3N1 280 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 LIMA1Q9UHB6 759 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 MEIS2O14770 477 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 MARCH6O60337 910 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 CDK5RAP3Q96JB5 506 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 MBOAT7Q96N66 472 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 ANO3Q9BYT9 981 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 ADD3Q9UEY8 706 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 GDAQ9Y2T3 454 aa19.01■□□□□ 0.63
SMARCD3-206ENST00000470588 HOXA7P31268 230 aaPredicted RBP19■□□□□ 0.63
SMARCD3-206ENST00000470588 ANGEL2Q5VTE6 544 aaKnown RBP19■□□□□ 0.63
SMARCD3-206ENST00000470588 CDAN1Q8IWY9 1227 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 ANKRD20A12PQ8NF67 263 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 HAS1Q92839 578 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 DHTKD1Q96HY7 919 aaPredicted RBP19■□□□□ 0.63
SMARCD3-206ENST00000470588 TEPSINQ96N21 525 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 PNMA5Q96PV4 448 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 PPP2R3BQ9Y5P8 575 aa19■□□□□ 0.63
SMARCD3-206ENST00000470588 PLA2G6O60733 806 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 TNNT1P13805 278 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 C9orf131Q5VYM1 1079 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 CHURC1Q8WUH1 139 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 PRR12Q9ULL5 1215 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 PCDHA12Q9UN75 941 aa18.99■□□□□ 0.63
SMARCD3-206ENST00000470588 COBLL1Q53SF7 1204 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 MYRIPQ8NFW9 859 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 TRPM4Q8TD43 1214 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ACER1Q8TDN7 264 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 NOC3LQ8WTT2 800 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 BLOC1S4Q9NUP1 217 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 EXOC1Q9NV70 894 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ASTN2O75129 1339 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 PSMA7O14818 248 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 CCP110O43303 1012 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ECE1P42892 770 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 STAT2P52630 851 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 SNAP25P60880 206 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ASIC1P78348 528 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 PDE4DQ08499 809 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 TMEM119Q4V9L6 283 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 CNNM4Q6P4Q7 775 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 SNX29Q8TEQ0 813 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ZNF341Q9BYN7 854 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 GGA3Q9NZ52 723 aa18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-206ENST00000470588 UQCRHLA0A096LP55 91 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 UQCRHP07919 91 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 PBX1P40424 430 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 EPS15P42566 896 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 HYIQ5T013 277 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 DPY19L2Q6NUT2 758 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 SLFN12Q8IYM2 578 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 CRYGNQ8WXF5 182 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 RAD54LQ92698 747 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 VCPKMTQ9H867 229 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 PITPNM2Q9BZ72 1349 aa18.97■□□□□ 0.63
SMARCD3-206ENST00000470588 MYH7BA7E2Y1 1941 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 TBX3O15119 743 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 TEX33O43247 280 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 DDNO94850 711 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 ARHGAP4P98171 946 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 GPR162Q16538 588 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 TCP11X2Q5H9J9 407 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 E4F1Q66K89 784 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 FAM160B2Q86V87 743 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 FCHSD1Q86WN1 690 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms