RNA–Protein interactions for RNA: ENST00000470314.5

NINJ1-203, Transcript of ninjurin 1, humanhuman

TSL 3

Gene NINJ1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-203ENST00000470314 USP17L18D6R9N7 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L22D6RA61 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L17D6RBQ6 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L19D6RCP7 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L20D6RJB6 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 CCP110O43303 1012 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 RAD21O60216 631 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 SREBF1P36956 1147 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L24Q0WX57 530 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.04
NINJ1-203ENST00000470314 TMEM119Q4V9L6 283 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 USP17L6PQ6QN14 398 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 FCHSD1Q86WN1 690 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
NINJ1-203ENST00000470314 NELFBQ8WX92 580 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 TMEM39BQ9GZU3 492 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 RANBP17Q9H2T7 1088 aaKnown RBP15.33■□□□□ 0.04
NINJ1-203ENST00000470314 VEZTQ9HBM0 779 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
NINJ1-203ENST00000470314 R3HCC1Q9Y3T6 440 aaKnown RBP15.33■□□□□ 0.04
NINJ1-203ENST00000470314 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 PHF20L1A8MW92 1017 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
NINJ1-203ENST00000470314 FZD9O00144 591 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 NFKBIEO00221 500 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 PSMA7O14818 248 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 MARCH6O60337 910 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 PBX1P40424 430 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 NBPF9Q3BBW0 867 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 UNC13DQ70J99 1090 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 CCAR2Q8N163 923 aaKnown RBP15.32■□□□□ 0.04
NINJ1-203ENST00000470314 SAMD3Q8N6K7 520 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 LRRC15Q8TF66 581 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 RAD54LQ92698 747 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
NINJ1-203ENST00000470314 THAP9Q9H5L6 903 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
NINJ1-203ENST00000470314 PAXBP1Q9Y5B6 917 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
NINJ1-203ENST00000470314 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 STX10O60499 249 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
NINJ1-203ENST00000470314 CCNE1P24864 410 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 EEF1GP26641 437 aaKnown RBP15.31■□□□□ 0.04
NINJ1-203ENST00000470314 ECE1P42892 770 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 STX17P56962 302 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 ARHGAP4P98171 946 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
NINJ1-203ENST00000470314 RASA3Q14644 834 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
NINJ1-203ENST00000470314 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
NINJ1-203ENST00000470314 HOOK2Q96ED9 719 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 CTNND2Q9UQB3 1225 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 ITIH6Q6UXX5 1313 aa15.31■□□□□ 0.04
NINJ1-203ENST00000470314 PDE4DQ08499 809 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 KIAA1755Q5JYT7 1200 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 SMYD4Q8IYR2 804 aaPredicted RBP15.3■□□□□ 0.04
NINJ1-203ENST00000470314 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 LPAR1Q92633 364 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 CCDC51Q96ER9 411 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 PANX2Q96RD6 677 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 PLIN2Q99541 437 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
NINJ1-203ENST00000470314 EXOC1Q9NV70 894 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
NINJ1-203ENST00000470314 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 RABGAP1Q9Y3P9 1069 aa15.3■□□□□ 0.04
NINJ1-203ENST00000470314 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
NINJ1-203ENST00000470314 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 ABCB11O95342 1321 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 OPLAHO14841 1288 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 PTGER2P43116 358 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 FAM83BQ5T0W9 1011 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 NYAP1Q6ZVC0 841 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 ETNPPLQ8TBG4 499 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 NAA15Q9BXJ9 866 aaKnown RBP15.29■□□□□ 0.04
NINJ1-203ENST00000470314 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
NINJ1-203ENST00000470314 MYMKA6NI61 221 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 KCNJ18B7U540 433 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
NINJ1-203ENST00000470314 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
NINJ1-203ENST00000470314 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 POLR2MP0CAP2 368 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 FDX1P10109 184 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
NINJ1-203ENST00000470314 COPB1P53618 953 aaKnown RBP15.28■□□□□ 0.04
NINJ1-203ENST00000470314 ASIC1P78348 528 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 GHRHRQ02643 423 aa15.28■□□□□ 0.04
NINJ1-203ENST00000470314 EHHADHQ08426 723 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms