RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ALCAMQ13740 583 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 MCM6Q14566 821 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 CROCCP2Q86T23 111 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 TMEM206Q9H813 350 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 SRPRBQ9Y5M8 271 aaKnown RBP16.56■□□□□ 0.24
LIMS2-213ENST00000469300 EBAG9O00559 213 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 ARHGAP44Q17R89 818 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 TSC1Q92574 1164 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 ZNF512BQ96KM6 892 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-213ENST00000469300 NLRC4Q9NPP4 1024 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 SLC39A2Q9NP94 309 aa16.56■□□□□ 0.24
LIMS2-213ENST00000469300 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-213ENST00000469300 ZNF215Q9UL58 517 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-213ENST00000469300 ZBTB5O15062 677 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 ORC4O43929 436 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
LIMS2-213ENST00000469300 PSMD2Q13200 908 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 RPS6KA1Q15418 735 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 RASGRP4Q8TDF6 673 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
LIMS2-213ENST00000469300 HESX1Q9UBX0 185 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 CEMIPQ8WUJ3 1361 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 POLR2BP30876 1174 aaKnown RBP16.55■□□□□ 0.24
LIMS2-213ENST00000469300 RCSD1Q6JBY9 416 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 NACA2Q9H009 215 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 PSAPP07602 524 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 COPB2P35606 906 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 POMGNT1Q8WZA1 660 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 ACCSQ96QU6 501 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
LIMS2-213ENST00000469300 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 PPP2R5EQ16537 467 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 C8orf74Q6P047 294 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 CD2APQ9Y5K6 639 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 PEX26Q7Z412 305 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 RPGRIP1Q96KN7 1286 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 E7EVH7 732 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 SNAP23O00161 211 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 TBC1D10BQ4KMP7 808 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 FAM193BQ96PV7 902 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 NR5A1Q13285 461 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 TBC1D16Q8TBP0 767 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 NSMCE1Q8WV22 266 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
LIMS2-213ENST00000469300 BZW2Q9Y6E2 419 aaKnown RBP16.54■□□□□ 0.24
LIMS2-213ENST00000469300 USP17L10C9JJH3 530 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 ATP5DP30049 168 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 RIMS1Q86UR5 1692 aaKnown RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 IKBKBO14920 756 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 PPP1R2P3Q6NXS1 205 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 RNF207Q6ZRF8 634 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 NEURL4Q96JN8 1562 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 USP42Q9H9J4 1324 aaKnown RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 A0A1B0GUA9 196 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 SARNPP82979 210 aaKnown RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 ARHGEF37A1IGU5 675 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-213ENST00000469300 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
LIMS2-213ENST00000469300 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.24
LIMS2-213ENST00000469300 TBC1D10CQ8IV04 446 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 TRIM58Q8NG06 486 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 RPS6KC1Q96S38 1066 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 UTP11Q9Y3A2 253 aaKnown RBP16.52■□□□□ 0.24
LIMS2-213ENST00000469300 ABCB11O95342 1321 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
LIMS2-213ENST00000469300 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 GJA10Q969M2 543 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 KMT5AQ9NQR1 393 aa16.52■□□□□ 0.24
LIMS2-213ENST00000469300 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 EVCP57679 992 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 RESTQ13127 1097 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 CCDC25Q86WR0 208 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 P2RX5Q93086 422 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.23
LIMS2-213ENST00000469300 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.23
LIMS2-213ENST00000469300 FANCLQ9NW38 375 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms