RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 CORINQ9Y5Q5 1042 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 CEMIPQ8WUJ3 1361 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 C5P01031 1676 aa6.52□□□□□ -1.37
U2AF1-207ENST00000468039 VIRMAQ69YN4 1812 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 DBX1A6NMT0 343 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 HTR3BO95264 441 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 FOSL1P15407 271 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 TMPOP42166 694 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 CHMP4BP1P59074 171 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 RACK1P63244 317 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 NKG7Q16617 165 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 PRAMEF13Q5VWM6 474 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 ZNF746Q6NUN9 644 aaPredicted RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 MCATQ8IVS2 390 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 DNAJC10Q8IXB1 793 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 SHISA5Q8N114 240 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 XAGE3Q8WTP9 111 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 SREK1Q8WXA9 508 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 RUNDC1Q96C34 613 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 SPATA32Q96LK8 384 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 DRC1Q96MC2 740 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 MIPEPQ99797 713 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 TGIF2Q9GZN2 237 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 PNNQ9H307 717 aaKnown RBP6.51□□□□□ -1.37
U2AF1-207ENST00000468039 TFCP2L1Q9NZI6 479 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 REV1Q9UBZ9 1251 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 TJP2Q9UDY2 1190 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 PCDHB14Q9Y5E9 798 aa6.51□□□□□ -1.37
U2AF1-207ENST00000468039 PNPLA7Q6ZV29 1317 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 SIPA1L3O60292 1781 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 CASZ1Q86V15 1759 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 APAF1O14727 1248 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 LEFTY1O75610 366 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TMEM201Q5SNT2 666 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 GK5Q6ZS86 529 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 FAM9BQ8IZU0 186 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TTC5Q8N0Z6 440 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 PNISRQ8TF01 805 aaKnown RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 ZNF496Q96IT1 587 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 KLHL3Q9UH77 587 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TPX2Q9ULW0 747 aaKnown RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-207ENST00000468039 DLG5Q8TDM6 1919 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TUBGCP6Q96RT7 1819 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TJP1Q07157 1748 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 NCANO14594 1321 aa6.5□□□□□ -1.37
U2AF1-207ENST00000468039 TAF1LQ8IZX4 1826 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 HTATSF1O43719 755 aaKnown RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 WNT11O96014 354 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 SPINK2P20155 84 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 CYP7A1P22680 504 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 CANXP27824 592 aaKnown RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 CRKP46108 304 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 ZNF790Q6PG37 636 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 COL23A1Q86Y22 540 aaPredicted RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
U2AF1-207ENST00000468039 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 DPH2Q9BQC3 489 aaPredicted RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 PRDM5Q9NQX1 630 aaPredicted RBP6.49□□□□□ -1.37
U2AF1-207ENST00000468039 COL5A3P25940 1745 aaPredicted RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 HEG1Q9ULI3 1381 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 PRRG2O14669 202 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 CRKLP46109 303 aaKnown RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 PIP4K2AP48426 406 aaPredicted RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 TNNI2P48788 182 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 PAK2Q13177 524 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 TAF7Q15545 349 aaPredicted RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 LRRFIP1Q32MZ4 808 aaKnown RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 LETMD1Q6P1Q0 360 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 PHACTR4Q8IZ21 702 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 INPP5FQ9Y2H2 1132 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 LAS1LQ9Y4W2 734 aaKnown RBP6.48□□□□□ -1.37
U2AF1-207ENST00000468039 UBR2Q8IWV8 1755 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 CNTNAP4Q9C0A0 1308 aa6.48□□□□□ -1.37
U2AF1-207ENST00000468039 SLITRK5O94991 958 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 ATE1O95260 518 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 CYP19A1P11511 503 aaPredicted RBP6.47□□□□□ -1.37
U2AF1-207ENST00000468039 IMPDH2P12268 514 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 ETV3P41162 512 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 LMOD3Q0VAK6 560 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 GNL2Q13823 731 aaKnown RBP6.47□□□□□ -1.37
U2AF1-207ENST00000468039 COL9A2Q14055 689 aaPredicted RBP6.47□□□□□ -1.37
U2AF1-207ENST00000468039 SFRP5Q5T4F7 317 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 COX4I2Q96KJ9 171 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 MTFR1LQ9H019 292 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 EHMT1Q9H9B1 1298 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 MKNK2Q9HBH9 465 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 TSPYL4Q9UJ04 414 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms