RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 MAP3K20Q9NYL2 800 aaKnown RBP12.36□□□□□ -0.43
TNRC18-209ENST00000464852 NOL7Q9UMY1 257 aaKnown RBP12.36□□□□□ -0.43
TNRC18-209ENST00000464852 TCHHQ07283 1943 aa12.36□□□□□ -0.43
TNRC18-209ENST00000464852 PARP14Q460N5 1801 aa12.36□□□□□ -0.43
TNRC18-209ENST00000464852 SMCHD1A6NHR9 2005 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 PIK3CDO00329 1044 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 PDHXO00330 501 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
TNRC18-209ENST00000464852 CCL5P13501 91 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 HERVK_113P62684 666 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 FAM161BQ96MY7 647 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
TNRC18-209ENST00000464852 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
TNRC18-209ENST00000464852 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
TNRC18-209ENST00000464852 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
TNRC18-209ENST00000464852 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
TNRC18-209ENST00000464852 BTBD19C9JJ37 291 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 GCOM1H8Y6P7 765 aaPredicted RBP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 MEIS2O14770 477 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 POLR2MP0CAP2 368 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 ALAS1P13196 640 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 PTMSP20962 102 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 MCM4P33991 863 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 TDHQ8IZJ6 230 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
TNRC18-209ENST00000464852 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 RTEL1Q9NZ71 1219 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
TNRC18-209ENST00000464852 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 OPLAHO14841 1288 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 ADAMTS3O15072 1205 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 SLC25A27O95847 323 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CFBP00751 764 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CTGFP29279 349 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 COPB2P35606 906 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 GCLCP48506 637 aaPredicted RBP12.33□□□□□ -0.44
TNRC18-209ENST00000464852 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
TNRC18-209ENST00000464852 GHRHRQ02643 423 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 PLS1Q14651 629 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 EARS2Q5JPH6 523 aaKnown RBP12.33□□□□□ -0.44
TNRC18-209ENST00000464852 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 RASGRP4Q8TDF6 673 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CLEC4DQ8WXI8 215 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 RBPJLQ9UBG7 517 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
TNRC18-209ENST00000464852 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 YEATS4O95619 227 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 BMP15O95972 392 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 NASPP49321 788 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 USP11P51784 963 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 UBE2SQ16763 222 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 SMCR8Q8TEV9 937 aaPredicted RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 TBC1D5Q92609 795 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 SNX27Q96L92 541 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
TNRC18-209ENST00000464852 SPATC1LQ9H0A9 340 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 BTBD7Q9P203 1132 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 RIPK3Q9Y572 518 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 ELP1O95163 1332 aa12.32□□□□□ -0.44
TNRC18-209ENST00000464852 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 CDH23Q9H251 3354 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
TNRC18-209ENST00000464852 SGPL1O95470 568 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 CYP2C8P10632 490 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
TNRC18-209ENST00000464852 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms