RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PPP1R14CQ8TAE6 165 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
HPS4-208ENST00000464362 IMPG2Q9BZV3 1241 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 TMEM260Q9NX78 707 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 AMFRQ9UKV5 643 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 PACSIN2Q9UNF0 486 aaPredicted RBP9.98□□□□□ -0.81
HPS4-208ENST00000464362 GDF11O95390 407 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 IFT88Q13099 833 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 ZRSR2Q15696 482 aaKnown RBP9.98□□□□□ -0.81
HPS4-208ENST00000464362 FAM196AQ6ZSG2 479 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 SGMS1Q86VZ5 419 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 FNBP1Q96RU3 617 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 TACO1Q9BSH4 297 aaKnown RBP9.98□□□□□ -0.81
HPS4-208ENST00000464362 NFU1Q9UMS0 254 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 MINPP1Q9UNW1 487 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 SPATA31A3Q5VYP0 1347 aa9.98□□□□□ -0.81
HPS4-208ENST00000464362 IFNB1P01574 187 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 MAN2A1Q16706 1144 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 SLFN13Q68D06 897 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 CLEC10AQ8IUN9 316 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 FAM178BQ8IXR5 827 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
HPS4-208ENST00000464362 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 IQCGQ9H095 443 aaKnown RBP9.97□□□□□ -0.81
HPS4-208ENST00000464362 ZNF185O15231 689 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 CYP19A1P11511 503 aaPredicted RBP9.97□□□□□ -0.81
HPS4-208ENST00000464362 PDCLQ13371 301 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 ZNF365Q70YC5 407 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 PHLDB2Q86SQ0 1253 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 PTPN22Q9Y2R2 807 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 ZNF335Q9H4Z2 1342 aaPredicted RBP9.97□□□□□ -0.81
HPS4-208ENST00000464362 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 SLCO1A2P46721 670 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 MXRA7P84157 204 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 NFRKBQ6P4R8 1299 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 USP37Q86T82 979 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 TMEM47Q9BQJ4 181 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 BPIFA3Q9BQP9 254 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 SMARCAL1Q9NZC9 954 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 GINS2Q9Y248 185 aa9.97□□□□□ -0.81
HPS4-208ENST00000464362 MYO1CO00159 1063 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 NEBLO76041 1014 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 ATP1A1P05023 1023 aaKnown RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 ICA1Q05084 483 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 TMC4Q7Z404 712 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 TEKT1Q969V4 418 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 EXOC4Q96A65 974 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 DBNDD1Q9H9R9 158 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 ATP8A1Q9Y2Q0 1164 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 ABCC12Q96J65 1359 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 LMTK2Q8IWU2 1503 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 PALLDQ8WX93 1383 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 ERVV-1B6SEH8 477 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L15C9J2P7 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L13C9JLJ4 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L11C9JVI0 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L18D6R9N7 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L22D6RA61 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L17D6RBQ6 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L19D6RCP7 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L20D6RJB6 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 CTIFO43310 598 aaKnown RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 GFPT2O94808 682 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 DLATP10515 647 aaKnown RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 HOXA13P31271 388 aaPredicted RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 CDK8P49336 464 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L24Q0WX57 530 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 USP17L6PQ6QN14 398 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 AEBP2Q6ZN18 517 aaPredicted RBP9.96□□□□□ -0.81
HPS4-208ENST00000464362 NKIRAS1Q9NYS0 192 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 HDAC9Q9UKV0 1011 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 MRFAP1Q9Y605 127 aa9.96□□□□□ -0.81
HPS4-208ENST00000464362 NRXN1Q9ULB1 1477 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 DESP17661 470 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 GFPT1Q06210 699 aaPredicted RBP9.96□□□□□ -0.82
HPS4-208ENST00000464362 MESDQ14696 234 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 UBL4BQ8N7F7 174 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 CCDC63Q8NA47 563 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 DDX12PQ92771 950 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.82
HPS4-208ENST00000464362 PCIF1Q9H4Z3 704 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 AGPAT5Q9NUQ2 364 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 DNAJC17Q9NVM6 304 aaKnown RBP9.96□□□□□ -0.82
HPS4-208ENST00000464362 STK38LQ9Y2H1 464 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 LGALS16A8MUM7 142 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 TCP10L2B9ZVM9 353 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 RGS16O15492 202 aaPredicted RBP9.96□□□□□ -0.82
HPS4-208ENST00000464362 ODR4Q5SWX8 454 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
HPS4-208ENST00000464362 JRKLQ9Y4A0 524 aa9.96□□□□□ -0.82
HPS4-208ENST00000464362 ZC3H13Q5T200 1668 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms