RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 MROH7Q68CQ1 1323 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 SLC27A2O14975 620 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 TIMP1P01033 207 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 CD4P01730 458 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 ACRP10323 421 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 TXNP10599 105 aaKnown RBP18.04■□□□□ 0.48
NUP50-213ENST00000461437 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
NUP50-213ENST00000461437 CYP2C18P33260 490 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 TROAPQ12815 778 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 MTMR8Q96EF0 704 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 RMDN3Q96TC7 470 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
NUP50-213ENST00000461437 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
NUP50-213ENST00000461437 ZBTB5O15062 677 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 PRC1O43663 620 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 ZEB2O60315 1214 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 SORBS3O60504 671 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 B4GALT4O60513 344 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 CSF2RAP15509 400 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 RXRAP19793 462 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 LY6KQ17RY6 165 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 CENPQQ7L2Z9 268 aaPredicted RBP18.03■□□□□ 0.48
NUP50-213ENST00000461437 SLC43A3Q8NBI5 491 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 RNPC3Q96LT9 517 aaKnown RBP18.03■□□□□ 0.48
NUP50-213ENST00000461437 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.48
NUP50-213ENST00000461437 LY9Q9HBG7 655 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 Q9Y3F1 56 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 PCDHA1Q9Y5I3 950 aa18.03■□□□□ 0.48
NUP50-213ENST00000461437 LOC102724159A0A0B4J2E5 919 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
NUP50-213ENST00000461437 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
NUP50-213ENST00000461437 PWP2Q15269 919 aaKnown RBP18.02■□□□□ 0.48
NUP50-213ENST00000461437 ARHGEF16Q5VV41 709 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 CREB3L3Q68CJ9 461 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 C16orf59Q7L2K0 433 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 MCF2L2Q86YR7 1114 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 SCFD2Q8WU76 684 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 PXMP2Q9NR77 195 aa18.02■□□□□ 0.48
NUP50-213ENST00000461437 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
NUP50-213ENST00000461437 A0A0C4DFX4 3053 aa18.02■□□□□ 0.47
NUP50-213ENST00000461437 CABYRO75952 493 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 CCL23P55773 120 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 SART3Q15020 963 aaKnown RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 FAM109BQ6ICB4 259 aaPredicted RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 MFSD5Q6N075 450 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 CATIPQ7Z7H3 387 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 ZNF654Q8IZM8 581 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 IL31RAQ8NI17 732 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
NUP50-213ENST00000461437 MPHOSPH6Q99547 160 aaKnown RBP18.01■□□□□ 0.47
NUP50-213ENST00000461437 MYO9BQ13459 2157 aa18■□□□□ 0.47
NUP50-213ENST00000461437 CDH23Q9H251 3354 aa18■□□□□ 0.47
NUP50-213ENST00000461437 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
NUP50-213ENST00000461437 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
NUP50-213ENST00000461437 CYP2C9P11712 490 aa18■□□□□ 0.47
NUP50-213ENST00000461437 CPT1AP50416 773 aa18■□□□□ 0.47
NUP50-213ENST00000461437 HSD17B4P51659 736 aa18■□□□□ 0.47
NUP50-213ENST00000461437 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
NUP50-213ENST00000461437 CCDC62Q6P9F0 684 aa18■□□□□ 0.47
NUP50-213ENST00000461437 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
NUP50-213ENST00000461437 AFG1LQ8WV93 481 aa18■□□□□ 0.47
NUP50-213ENST00000461437 GRXCR1A8MXD5 290 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 NR3C2P08235 984 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 NECTIN1Q15223 517 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 STXBP2Q15833 593 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 NBPF20Q3BBV1 942 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 TMEM240Q5SV17 173 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 GPKOWQ92917 476 aaPredicted RBP eCLIP17.99■□□□□ 0.47
NUP50-213ENST00000461437 SCLYQ96I15 445 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 MTG1Q9BT17 334 aaPredicted RBP17.99■□□□□ 0.47
NUP50-213ENST00000461437 WNT8AQ9H1J5 351 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
NUP50-213ENST00000461437 HIPK3Q9H422 1215 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 TET1Q8NFU7 2136 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 TANC1Q9C0D5 1861 aa17.99■□□□□ 0.47
NUP50-213ENST00000461437 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 B4DLN1 442 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 NKRFO15226 690 aaKnown RBP eCLIP17.98■□□□□ 0.47
NUP50-213ENST00000461437 RGS20O76081 388 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 MRPL12P52815 198 aaKnown RBP17.98■□□□□ 0.47
NUP50-213ENST00000461437 ARHGAP1Q07960 439 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 ZNF697Q5TEC3 545 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms