RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CACNB2Q08289 660 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 PPP2R5EQ16537 467 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 WWC2Q6AWC2 1192 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 HHIPL2Q6UWX4 724 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 FAM124AQ86V42 546 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 CPNE8Q86YQ8 564 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 OR6P1Q8NGX9 317 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 GPRASP2Q96D09 838 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 TGIF2Q9GZN2 237 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 AP5M1Q9H0R1 490 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 PCDH18Q9HCL0 1135 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 GULP1Q9UBP9 304 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 INPP5FQ9Y2H2 1132 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 DCP2Q8IU60 420 aaKnown RBP5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 CPA5Q8WXQ8 436 aa5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 FGD4Q96M96 766 aa5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 SMPD4Q9NXE4 827 aa5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 MYRFQ9Y2G1 1151 aa5.6□□□□□ -1.51
SPTLC1-203ENST00000461132 LTBP3Q9NS15 1303 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 FUCA1P04066 466 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 EPHX1P07099 455 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 NAT2P11245 290 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 MAGEA10P43363 369 aaPredicted RBP5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 KIAA2012Q0VF49 1180 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 GRB10Q13322 594 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 ZC3H18Q86VM9 953 aaKnown RBP5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 CPLX3Q8WVH0 158 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 LNPKQ9C0E8 428 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 CGGBP1Q9UFW8 167 aaPredicted RBP5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 PCDHB10Q9UN67 800 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
SPTLC1-203ENST00000461132 NOBOXO60393 691 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 SMAD4Q13485 552 aaKnown RBP5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 POMZP3Q6PJE2 187 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 ETV3LQ6ZN32 361 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 CHST13Q8NET6 341 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 PPP1R14AQ96A00 147 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 LOXL4Q96JB6 756 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 MCMBPQ9BTE3 642 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 KLHL25Q9H0H3 589 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 GINM1Q9NU53 330 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 AKT3Q9Y243 479 aa5.58□□□□□ -1.52
SPTLC1-203ENST00000461132 ZNF536O15090 1300 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 NOP56O00567 594 aaKnown RBP5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 NTRK1P04629 796 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 ZNF761Q86XN6 746 aaPredicted RBP5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 VPS37DQ86XT2 251 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 ARHGEF39Q8N4T4 335 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 C19orf47Q8N9M1 422 aaKnown RBP5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 ADAMTS17Q8TE56 1095 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 NOX5Q96PH1 765 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 YIPF4Q9BSR8 244 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 BTG4Q9NY30 223 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 MARCH2Q9P0N8 246 aa5.57□□□□□ -1.52
SPTLC1-203ENST00000461132 C7orf72A4D263 438 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 ANKRD34BA5PLL1 514 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 ITGB3P05106 788 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 RGL3Q3MIN7 710 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 VHLLQ6RSH7 139 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 CD300LDQ6UXZ3 194 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 LGI4Q8N135 537 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 RASGRP4Q8TDF6 673 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 MTA3Q9BTC8 594 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 DUSP10Q9Y6W6 482 aa5.56□□□□□ -1.52
SPTLC1-203ENST00000461132 A0A1W2PQH9 124 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 KCNH1O95259 989 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 GJA8P48165 433 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 SOX9P48436 509 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 GIPRP48546 466 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 NASPP49321 788 aaPredicted RBP5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 KIAA1211LQ6NV74 962 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 APBA2Q99767 749 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 SPATA6Q9NWH7 488 aaPredicted RBP5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
SPTLC1-203ENST00000461132 PLATP00750 562 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 ADAM17P78536 824 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 SCRN1Q12765 414 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 CPZQ66K79 652 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 KYQ8NBH2 561 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 SEC14L1Q92503 715 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 SEC16BQ96JE7 1060 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 C11orf84Q9BUA3 381 aaPredicted RBP5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 NGRNQ9NPE2 291 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 FBLN5Q9UBX5 448 aa5.54□□□□□ -1.52
SPTLC1-203ENST00000461132 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 MYO1BO43795 1136 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms