RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ERLIN1O75477 346 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 SASH3O75995 380 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 TBC1D8BQ0IIM8 1120 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 WDR93Q6P2C0 686 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 PKNOX2Q96KN3 472 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 GPR101Q96P66 508 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 EHD4Q9H223 541 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 LRWD1Q9UFC0 647 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 MYO6Q9UM54 1294 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 ARFGEF1Q9Y6D6 1849 aa13.98□□□□□ -0.17
ECHDC1-209ENST00000454591 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 MYH7BA7E2Y1 1941 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 POLRMTO00411 1230 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 KRT86O43790 486 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 SEC31AO94979 1220 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 LCA5LO95447 670 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 TECP42680 631 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 CALCRLQ16602 461 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 BEND6Q5SZJ8 279 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 TAF3Q5VWG9 929 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 PROM2Q8N271 834 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 LARP4BQ92615 738 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 RAD54LQ92698 747 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 MRIQ9BWK5 157 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 ZNHIT6Q9NWK9 470 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 SIK3Q9Y2K2 1263 aa13.97□□□□□ -0.17
ECHDC1-209ENST00000454591 MYMKA6NI61 221 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 B4DLN1 442 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 TTLL1O95922 423 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 ABL1P00519 1130 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 CYP2C19P33261 490 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 CCDC17Q96LX7 622 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 CPVLQ9H3G5 476 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 L1RE1Q9UN81 338 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 ATP6V0A2Q9Y487 856 aa13.96□□□□□ -0.17
ECHDC1-209ENST00000454591 FCER1AP12319 257 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MTIF2P46199 727 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 FKBP1AP62942 108 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 DDR1Q08345 913 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MBOAT7Q96N66 472 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 NOC4LQ9BVI4 516 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 SLC37A4O43826 429 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 AKR1B1P15121 316 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MCM3P25205 808 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 SHMT1P34896 483 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 VAV2P52735 878 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 ITIH3Q06033 890 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 SMC1AQ14683 1233 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 LRRC55Q6ZSA7 311 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 ZNF771Q7L3S4 317 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 HDXQ7Z353 690 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 ZNF572Q7Z3I7 529 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 RUBCNQ92622 972 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 MKL1Q969V6 931 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 PLIN2Q99541 437 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 EPC1Q9H2F5 836 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
ECHDC1-209ENST00000454591 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 CYP3A7-CYP3A51PA0A087WV96 503 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 ZBTB5O15062 677 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 PRLRP16471 622 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 CYP3A7P24462 503 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 TXKP42681 527 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 MARSP56192 900 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 CKAP4Q07065 602 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 MCM6Q14566 821 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 CCDC122Q5T0U0 273 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms