RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RMDN3Q96TC7 470 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 CHMP4BP1P59074 171 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 SEC23AQ15436 765 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 TMEM67Q5HYA8 995 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 FAM109BQ6ICB4 259 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-208ENST00000451893 SEPT14Q6ZU15 432 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 CATIPQ7Z7H3 387 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 HIPK3Q9H422 1215 aa25.11■■□□□ 1.61
C9orf3-208ENST00000451893 RBM47A0AV96 593 aaKnown RBP25.1■■□□□ 1.61
C9orf3-208ENST00000451893 SMAD3P84022 425 aaKnown RBP25.1■■□□□ 1.61
C9orf3-208ENST00000451893 STXBP2Q15833 593 aa25.1■■□□□ 1.61
C9orf3-208ENST00000451893 CHST3Q7LGC8 479 aa25.1■■□□□ 1.61
C9orf3-208ENST00000451893 SYTL5Q8TDW5 730 aaPredicted RBP25.1■■□□□ 1.61
C9orf3-208ENST00000451893 TAAR1Q96RJ0 339 aa25.1■■□□□ 1.61
C9orf3-208ENST00000451893 MTG1Q9BT17 334 aaPredicted RBP25.1■■□□□ 1.61
C9orf3-208ENST00000451893 STXBP5LQ9Y2K9 1186 aa25.1■■□□□ 1.61
C9orf3-208ENST00000451893 RBM8AQ9Y5S9 174 aaKnown RBP25.1■■□□□ 1.61
C9orf3-208ENST00000451893 ZBTB5O15062 677 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 EIF2AK2P19525 551 aaKnown RBP25.09■■□□□ 1.61
C9orf3-208ENST00000451893 EDNRBP24530 442 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 EPHB4P54760 987 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 PSRC1Q6PGN9 363 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-208ENST00000451893 TBC1D5Q92609 795 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 IWS1Q96ST2 819 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 MTIF3Q9H2K0 278 aaKnown RBP25.09■■□□□ 1.61
C9orf3-208ENST00000451893 MAD2L2Q9UI95 211 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 PCDHA1Q9Y5I3 950 aa25.09■■□□□ 1.61
C9orf3-208ENST00000451893 KPNA6O60684 536 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 SUPT20HL2P0C7V6 817 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 CSF2RAP15509 400 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 CYP2C18P33260 490 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 GRM4Q14833 912 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 NFXL1Q6ZNB6 911 aa25.08■■□□□ 1.61
C9orf3-208ENST00000451893 CD4P01730 458 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 PURAQ00577 322 aaKnown RBP25.07■■□□□ 1.6
C9orf3-208ENST00000451893 SLC43A3Q8NBI5 491 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 COPS5Q92905 334 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.07■■□□□ 1.65e-10■■■□□ 15.4
C9orf3-208ENST00000451893 TRPV6Q9H1D0 765 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 NOD1Q9Y239 953 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 KIAA1217Q5T5P2 1943 aa25.07■■□□□ 1.6
C9orf3-208ENST00000451893 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-208ENST00000451893 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-208ENST00000451893 PALM3A6NDB9 673 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-208ENST00000451893 B4GALT4O60513 344 aa25.06■■□□□ 1.6
C9orf3-208ENST00000451893 CTCFLQ8NI51 663 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-208ENST00000451893 MAP4K1Q92918 833 aa25.06■■□□□ 1.6
C9orf3-208ENST00000451893 BAZ2BQ9UIF8 2168 aaKnown RBP25.05■■□□□ 1.6
C9orf3-208ENST00000451893 GH1P01241 217 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 ACRP10323 421 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 MYCLP12524 364 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-208ENST00000451893 CCL23P55773 120 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 PIBF1Q8WXW3 757 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 PIGSQ96S52 555 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 ALDH8A1Q9H2A2 487 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-208ENST00000451893 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 MRVI1Q9Y6F6 885 aa25.05■■□□□ 1.6
C9orf3-208ENST00000451893 KIF5BP33176 963 aa25.04■■□□□ 1.6
C9orf3-208ENST00000451893 IL23AQ9NPF7 189 aa25.04■■□□□ 1.6
C9orf3-208ENST00000451893 PXMP2Q9NR77 195 aa25.04■■□□□ 1.6
C9orf3-208ENST00000451893 MAP3K20Q9NYL2 800 aaKnown RBP25.04■■□□□ 1.6
C9orf3-208ENST00000451893 COL20A1Q9P218 1284 aa25.04■■□□□ 1.6
C9orf3-208ENST00000451893 CCDC69A6NI79 296 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 GCOM1H8Y6P7 765 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-208ENST00000451893 EIF3JO75822 258 aaKnown RBP25.03■■□□□ 1.6
C9orf3-208ENST00000451893 NR3C2P08235 984 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 POLR2MP0CAP2 368 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 LY6KQ17RY6 165 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 STOX1Q6ZVD7 989 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 ZNF365Q70YC5 407 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 RPUSD2Q8IZ73 545 aaKnown RBP25.03■■□□□ 1.6
C9orf3-208ENST00000451893 SEC63Q9UGP8 760 aaKnown RBP25.03■■□□□ 1.6
C9orf3-208ENST00000451893 GRIN2DO15399 1336 aa25.03■■□□□ 1.6
C9orf3-208ENST00000451893 ARIH2O95376 493 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 FGBP02675 491 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 HOXA13P31271 388 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-208ENST00000451893 MCM5P33992 734 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 NBPF20Q3BBV1 942 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 TMEM240Q5SV17 173 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 SAMD3Q8N6K7 520 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 ESYT1Q9BSJ8 1104 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 TRMT13Q9NUP7 481 aaKnown RBP25.02■■□□□ 1.6
C9orf3-208ENST00000451893 TAF6LQ9Y6J9 622 aa25.02■■□□□ 1.6
C9orf3-208ENST00000451893 PNMA6FA0A0J9YX94 578 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 A6NJR5 290 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 PRC1O43663 620 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 SEC24BO95487 1268 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 CASTP20810 708 aaKnown RBP25.01■■□□□ 1.59
C9orf3-208ENST00000451893 HSD17B4P51659 736 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 FCHSD1Q86WN1 690 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 MB21D2Q8IYB1 491 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-208ENST00000451893 RETREG2Q8NC44 543 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 AFG1LQ8WV93 481 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 GUCD1Q96NT3 240 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 NOC4LQ9BVI4 516 aaKnown RBP25.01■■□□□ 1.59
C9orf3-208ENST00000451893 SEMA6BQ9H3T3 888 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 RIOX1Q9H6W3 641 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 SENP2Q9HC62 589 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 MYH7BA7E2Y1 1941 aa25.01■■□□□ 1.59
C9orf3-208ENST00000451893 TMEM265A0A087WTH1 108 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms