RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
TOM1-211ENST00000449508 COPS5Q92905 334 aa15.97■□□□□ 0.15
TOM1-211ENST00000449508 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
TOM1-211ENST00000449508 IL23AQ9NPF7 189 aa15.97■□□□□ 0.15
TOM1-211ENST00000449508 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 ERICH2A1L162 156 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 DLL1O00548 723 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
TOM1-211ENST00000449508 CFBP00751 764 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 CCL23P55773 120 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 STXBP2Q15833 593 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 PSRC1Q6PGN9 363 aaPredicted RBP15.96■□□□□ 0.15
TOM1-211ENST00000449508 SEPT14Q6ZU15 432 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 RMDN3Q96TC7 470 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 ALDH8A1Q9H2A2 487 aaPredicted RBP15.96■□□□□ 0.15
TOM1-211ENST00000449508 COL20A1Q9P218 1284 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 MAD2L2Q9UI95 211 aa15.96■□□□□ 0.15
TOM1-211ENST00000449508 KIAA1217Q5T5P2 1943 aa15.96■□□□□ 0.14
TOM1-211ENST00000449508 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
TOM1-211ENST00000449508 TMEM265A0A087WTH1 108 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 A6NJR5 290 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 E7EWF7 191 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 SGSM2O43147 1006 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 KPNA6O60684 536 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 ARIH2O95376 493 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 FGBP02675 491 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 SUPT20HL2P0C7V6 817 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 DNAJB2P25686 324 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 NBPF20Q3BBV1 942 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 ARHGEF16Q5VV41 709 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 RALYLQ86SE5 291 aaKnown RBP15.95■□□□□ 0.14
TOM1-211ENST00000449508 NCOA7Q8NI08 942 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 MYLIPQ8WY64 445 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 IWS1Q96ST2 819 aa15.95■□□□□ 0.14
TOM1-211ENST00000449508 NOC4LQ9BVI4 516 aaKnown RBP15.95■□□□□ 0.14
TOM1-211ENST00000449508 TRMT13Q9NUP7 481 aaKnown RBP15.95■□□□□ 0.14
TOM1-211ENST00000449508 PALM3A6NDB9 673 aaPredicted RBP15.94■□□□□ 0.14
TOM1-211ENST00000449508 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 ZBTB5O15062 677 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 EIF2AK2P19525 551 aaKnown RBP15.94■□□□□ 0.14
TOM1-211ENST00000449508 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
TOM1-211ENST00000449508 LY6KQ17RY6 165 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 FAM47CQ5HY64 1035 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 RASIP1Q5U651 963 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 CCDC62Q6P9F0 684 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 CHST3Q7LGC8 479 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 PCDHA1Q9Y5I3 950 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 A0A0C4DFX4 3053 aa15.94■□□□□ 0.14
TOM1-211ENST00000449508 NR3C2P08235 984 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 CYP2C9P11712 490 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 CHMP4BP1P59074 171 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 GRM4Q14833 912 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 WTAPQ15007 396 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
TOM1-211ENST00000449508 PPP1R13LQ8WUF5 828 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 HERVK_113Q902F9 699 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 MAP4K1Q92918 833 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 MTMR8Q96EF0 704 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 SCLYQ96I15 445 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
TOM1-211ENST00000449508 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 TAF6LQ9Y6J9 622 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 MYH7BA7E2Y1 1941 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
TOM1-211ENST00000449508 MYO9BQ13459 2157 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
TOM1-211ENST00000449508 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
TOM1-211ENST00000449508 GH1P01241 217 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 TMEM67Q5HYA8 995 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 OTOP2Q7RTS6 562 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 AFG1LQ8WV93 481 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 TIFAQ96CG3 184 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 PIGSQ96S52 555 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 PBX4Q9BYU1 374 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 ZNF576Q9H609 170 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 RIOX1Q9H6W3 641 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 PXMP2Q9NR77 195 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 MAP3K20Q9NYL2 800 aaKnown RBP15.92■□□□□ 0.14
TOM1-211ENST00000449508 CXXC1Q9P0U4 656 aaPredicted RBP15.92■□□□□ 0.14
TOM1-211ENST00000449508 CUL9Q8IWT3 2517 aa15.92■□□□□ 0.14
TOM1-211ENST00000449508 OPLAHO14841 1288 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
TOM1-211ENST00000449508 FOSL2P15408 326 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 PBX2P40425 430 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 HSD17B4P51659 736 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 PTPN11Q06124 597 aaPredicted RBP15.91■□□□□ 0.14
TOM1-211ENST00000449508 TRAF1Q13077 416 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 GRIN2CQ14957 1233 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 STOX1Q6ZVD7 989 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 CATIPQ7Z7H3 387 aa15.91■□□□□ 0.14
TOM1-211ENST00000449508 MAFAQ8NHW3 353 aaPredicted RBP15.91■□□□□ 0.14
TOM1-211ENST00000449508 DDX41Q9UJV9 622 aaKnown RBP15.91■□□□□ 0.14
TOM1-211ENST00000449508 RBM8AQ9Y5S9 174 aaKnown RBP15.91■□□□□ 0.14
TOM1-211ENST00000449508 MMP3P08254 477 aa15.9■□□□□ 0.14
TOM1-211ENST00000449508 CASTP20810 708 aaKnown RBP15.9■□□□□ 0.14
TOM1-211ENST00000449508 HOXA13P31271 388 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms