RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RRP36Q96EU6 259 aaKnown RBP14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 GDF15Q99988 308 aa14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 AP5M1Q9H0R1 490 aa14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 MAP3K20Q9NYL2 800 aaKnown RBP14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 Q9Y3F1 56 aa14.76□□□□□ -0.05
PRPF40A-203ENST00000448428 HOXA13P31271 388 aaPredicted RBP14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 TLE2Q04725 743 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 FSCN1Q16658 493 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 ARHGEF16Q5VV41 709 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 SYNE3Q6ZMZ3 975 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 MICU3Q86XE3 530 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 SAMD3Q8N6K7 520 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 IWS1Q96ST2 819 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 USP26Q9BXU7 913 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 STARD7Q9NQZ5 370 aa14.75□□□□□ -0.05
PRPF40A-203ENST00000448428 ELP1O95163 1332 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 GCOM1H8Y6P7 765 aaPredicted RBP14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 NR3C2P08235 984 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 POLR2MP0CAP2 368 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 EIF2AK2P19525 551 aaKnown RBP14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 MAGEA10P43363 369 aaPredicted RBP14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 STXBP2Q15833 593 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 SCFD2Q8WU76 684 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 VTI1AQ96AJ9 217 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 GLT1D1Q96MS3 346 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 PXMP2Q9NR77 195 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 MYH7BA7E2Y1 1941 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 DNAH12Q6ZR08 3092 aa14.74□□□□□ -0.05
PRPF40A-203ENST00000448428 EPB41L2O43491 1005 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 BMP8BP34820 402 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 BLOC1S2Q6QNY1 142 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 CXCL17Q6UXB2 119 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 SEPT14Q6ZU15 432 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 Q6ZUG5 572 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 SH3RF1Q7Z6J0 888 aa14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 SEC63Q9UGP8 760 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-203ENST00000448428 KLF18A0A0U1RQI7 1052 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 NKRFO15226 690 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 ZBTB43O43298 467 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 ARIH2O95376 493 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 TXNP10599 105 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 CDK7P50613 346 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 MDM2Q00987 491 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 TTLL4Q14679 1199 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 PPP2R5BQ15173 497 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 CCDC62Q6P9F0 684 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 ANKRD33Q7Z3H0 272 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 FCHSD1Q86WN1 690 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 COPS5Q92905 334 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 PDCD2LQ9BRP1 358 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 PDLIM7Q9NR12 457 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 FAM217BQ9NTX9 383 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
PRPF40A-203ENST00000448428 LTBP2Q14767 1821 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 ARVCFO00192 962 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 ZEB2O60315 1214 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 PQBP1O60828 265 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 MYCLP12524 364 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 RPS6KB1P23443 525 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 PSMA5P28066 241 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 FGD1P98174 961 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 APOBRQ0VD83 1088 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 FAAP100Q0VG06 881 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 FUT2Q10981 343 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 PGM5Q15124 567 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 RTN1Q16799 776 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 VSIG10LQ86VR7 867 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 IL31RAQ8NI17 732 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 TOX2Q96NM4 488 aa14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 RBM28Q9NW13 759 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-203ENST00000448428 GRIN2DO15399 1336 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 DCDC2CA8MYV0 355 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 CABYRO75952 493 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 CLTBP09497 229 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 CASTP20810 708 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 CDC27P30260 824 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 LY6KQ17RY6 165 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 USP17L6PQ6QN14 398 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 FBXL16Q8N461 479 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 BRF1Q92994 677 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 ZFP91Q96JP5 570 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 DDX41Q9UJV9 622 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 NAP1L2Q9ULW6 460 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-203ENST00000448428 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
PRPF40A-203ENST00000448428 A0A1W2PPC1 479 aa14.69□□□□□ -0.06
PRPF40A-203ENST00000448428 A6NJR5 290 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms