RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 PRPHP41219 470 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 HNRNPH2P55795 449 aaKnown RBP10.52□□□□□ -0.73
KLHL3-202ENST00000447439 C2orf54Q08AI8 447 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 BRD3Q15059 726 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 SNX29Q8TEQ0 813 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 CALML4Q96GE6 196 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.73
KLHL3-202ENST00000447439 CDK5RAP3Q96JB5 506 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 C7orf25Q9BPX7 421 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 POLD4Q9HCU8 107 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 A0A1W2PQC6 194 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 FAM170AA1A519 330 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CXCR5P32302 372 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 LMAN1P49257 510 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 DNA2P51530 1060 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ADCY7P51828 1080 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ENOX2Q16206 610 aaKnown RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 FKBP15Q5T1M5 1219 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 TRAPPC11Q7Z392 1133 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 TMC4Q7Z404 712 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MSANTD4Q8NCY6 345 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 PLEKHA4Q9H4M7 779 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L10C9JJH3 530 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MAP2K7O14733 419 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 GYS1P13807 737 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 WHAMMP3Q1A5X7 153 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CCDC96Q2M329 555 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 SV2BQ7L1I2 683 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ZFPM1Q8IX07 1006 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 NELFCDQ8IXH7 590 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CERS5Q8N5B7 392 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CAGE1Q8TC20 777 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CCDC102AQ96A19 550 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MTMR9Q96QG7 549 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MTMR4Q9NYA4 1195 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 FAN1Q9Y2M0 1017 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CAPN6Q9Y6Q1 641 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 BTAF1O14981 1849 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 COL24A1Q17RW2 1714 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 LAD1O00515 517 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 NCK2O43639 380 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 MOCS3O95396 460 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 CASP8Q14790 479 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 EZH2Q15910 746 aaKnown RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 DDX12PQ92771 950 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 HAUS4Q9H6D7 363 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 JMJD4Q9H9V9 463 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ZNF287Q9HBT7 754 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 KCNQ5Q9NR82 932 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ZNHIT6Q9NWK9 470 aaKnown RBP10.51□□□□□ -0.73
KLHL3-202ENST00000447439 ARHGAP20Q9P2F6 1191 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 L1RE1Q9UN81 338 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 SAR1BQ9Y6B6 198 aa10.51□□□□□ -0.73
KLHL3-202ENST00000447439 NAV1Q8NEY1 1877 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 BICDL2A1A5D9 508 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 MYBL2P10244 700 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 IL1R1P14778 569 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 STAT3P40763 770 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 ZBED6P86452 979 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 DDR1Q08345 913 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 TCP10Q12799 353 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 MEA1Q16626 185 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 RRAGAQ7L523 313 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
KLHL3-202ENST00000447439 AK8Q96MA6 479 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 CRACR2AQ9BSW2 395 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 NLRC4Q9NPP4 1024 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 ADAM21Q9UKJ8 722 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 LRRC53A6NM62 1247 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 PSMD14O00487 310 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 MARCH6O60337 910 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 EIF4A3P38919 411 aaKnown RBP10.5□□□□□ -0.73
KLHL3-202ENST00000447439 NFIAQ12857 509 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 VWA3BQ502W6 1294 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 CNNM4Q6P4Q7 775 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 HDXQ7Z353 690 aa10.5□□□□□ -0.73
KLHL3-202ENST00000447439 CCDC42Q96M95 316 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms