RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 VCX3BQ9H321 246 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 LUC7L3O95232 432 aaKnown RBP7.7□□□□□ -1.18
CDK12-202ENST00000447079 LMNB2Q03252 620 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 CUL4BQ13620 913 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 LSM14BQ9BX40 385 aaKnown RBP7.7□□□□□ -1.18
CDK12-202ENST00000447079 MYO1AQ9UBC5 1043 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 AFDNP55196 1824 aaKnown RBP7.7□□□□□ -1.18
CDK12-202ENST00000447079 STAM2O75886 525 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 KRT19P08727 400 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 IFNAR1P17181 557 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 SYDE2Q5VT97 1194 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 BBOF1Q8ND07 529 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 LARP4BQ92615 738 aaKnown RBP7.7□□□□□ -1.18
CDK12-202ENST00000447079 ZNF577Q9BSK1 485 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 ATP8B3O60423 1300 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 PNMA6FA0A0J9YX94 578 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 ZNF233A6NK53 670 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 SH2B2O14492 632 aaPredicted RBP7.7□□□□□ -1.18
CDK12-202ENST00000447079 AP3B2Q13367 1082 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 MRFAP1L1Q96HT8 127 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 NBPF3Q9H094 633 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 AP5M1Q9H0R1 490 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 MMP1P03956 469 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 FDX1P10109 184 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 NCAPG2Q86XI2 1143 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 PAGR1Q9BTK6 254 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 SERTAD1Q9UHV2 236 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 SLC7A3Q8WY07 619 aa7.7□□□□□ -1.18
CDK12-202ENST00000447079 ZBTB24O43167 697 aaPredicted RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 CRCPO75575 148 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CABS1Q96KC9 395 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 TAB2Q9NYJ8 693 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 C1orf167Q5SNV9 1468 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 GOLGA8CPA6NN73 597 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 DENND2CQ68D51 928 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 DGKHQ86XP1 1220 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 MICAL1Q8TDZ2 1067 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 SYMPKQ92797 1274 aaKnown RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 ANKRD36BP1Q96IX9 119 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 HESX1Q9UBX0 185 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CIB2O75838 187 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PTPREP23469 700 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 FAM26FQ5R3K3 315 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 RRAGAQ7L523 313 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 DPP9Q86TI2 863 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 EFCAB13Q8IY85 973 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.69□□□□□ -1.186e-10■■■□□ 18.4
CDK12-202ENST00000447079 ZNF335Q9H4Z2 1342 aaPredicted RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 TMEM191BP0C7N4 346 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CD19P15391 556 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 POMGNT1Q8WZA1 660 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 TBC1D7Q9P0N9 293 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 HMGB1P1B2RPK0 211 aaPredicted RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 IKBKBO14920 756 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 TLR3O15455 904 aaKnown RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 ARMCX5Q6P1M9 558 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PODNQ7Z5L7 613 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 FAM193BQ96PV7 902 aaPredicted RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 RPS6KC1Q96S38 1066 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PPP1R12CQ9BZL4 782 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 ASIC3Q9UHC3 531 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 USH1CQ9Y6N9 552 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 ATP8B1O43520 1251 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CIAPIN1Q6FI81 312 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 ACCSQ96QU6 501 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 SAR1BQ9Y6B6 198 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PPFIA4O75335 1185 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 PSMC2P35998 433 aaKnown RBP7.69□□□□□ -1.18
CDK12-202ENST00000447079 PIK3CAP42336 1068 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 JAK3P52333 1124 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 RINT1Q6NUQ1 792 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 MAEAQ7L5Y9 396 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 TTLL11Q8NHH1 800 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 GSDMBQ8TAX9 411 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CARD6Q9BX69 1037 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 RAB20Q9NX57 234 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 FBXO40Q9UH90 709 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
CDK12-202ENST00000447079 VIMP08670 466 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 MFAP3P55082 362 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 MECOMQ03112 1051 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 KRT81Q14533 505 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 RSAD2Q8WXG1 361 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 PSMD1Q99460 953 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 KCNK9Q9NPC2 374 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 IPO11Q9UI26 975 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 GINS2Q9Y248 185 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 I3L4J1 428 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 ADD1P35611 737 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 CYP2J2P51589 502 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 USP28Q96RU2 1077 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms