RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 CALM3P0DP25 149 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 EIF2AK2P19525 551 aaKnown RBP17.73■□□□□ 0.43
SEC22C-208ENST00000445388 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
SEC22C-208ENST00000445388 GHRHRQ02643 423 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 FSCN1Q16658 493 aaKnown RBP17.73■□□□□ 0.43
SEC22C-208ENST00000445388 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 COPS5Q92905 334 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 VTI1AQ96AJ9 217 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 RRP36Q96EU6 259 aaKnown RBP17.73■□□□□ 0.43
SEC22C-208ENST00000445388 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
SEC22C-208ENST00000445388 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 PXMP2Q9NR77 195 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 Q9Y3F1 56 aa17.73■□□□□ 0.43
SEC22C-208ENST00000445388 B4DLN1 442 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 REC8O95072 547 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 ARIH2O95376 493 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 GNAQP50148 359 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
SEC22C-208ENST00000445388 CXCL17Q6UXB2 119 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
SEC22C-208ENST00000445388 PDLIM7Q9NR12 457 aa17.72■□□□□ 0.43
SEC22C-208ENST00000445388 TRIM43BA6NCK2 446 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 NR3C2P08235 984 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 POLR2MP0CAP2 368 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 TXNP10599 105 aaKnown RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 TRAF1Q13077 416 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 STXBP2Q15833 593 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 TMTC3Q6ZXV5 915 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
SEC22C-208ENST00000445388 TRIM43Q96BQ3 446 aaPredicted RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
SEC22C-208ENST00000445388 ELP1O95163 1332 aa17.71■□□□□ 0.42
SEC22C-208ENST00000445388 CEP290O15078 2479 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 KLF18A0A0U1RQI7 1052 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
SEC22C-208ENST00000445388 MYCLP12524 364 aaPredicted RBP17.7■□□□□ 0.42
SEC22C-208ENST00000445388 BMP8BP34820 402 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 CDK7P50613 346 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEC22C-208ENST00000445388 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 Q6ZUG5 572 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 PDCD2LQ9BRP1 358 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 USP26Q9BXU7 913 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 PRKAG2Q9UGJ0 569 aa17.7■□□□□ 0.42
SEC22C-208ENST00000445388 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
SEC22C-208ENST00000445388 ZBTB43O43298 467 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 ITGB8P26012 769 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 PSMC6P62333 389 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 APOBRQ0VD83 1088 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 LY6KQ17RY6 165 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 ANKRD33Q7Z3H0 272 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 SAMD3Q8N6K7 520 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
SEC22C-208ENST00000445388 FAM217BQ9NTX9 383 aaPredicted RBP17.69■□□□□ 0.42
SEC22C-208ENST00000445388 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
SEC22C-208ENST00000445388 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
SEC22C-208ENST00000445388 A0A0U1RQG5 324 aaPredicted RBP17.68■□□□□ 0.42
SEC22C-208ENST00000445388 ARVCFO00192 962 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 ZEB2O60315 1214 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
SEC22C-208ENST00000445388 CLTBP09497 229 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 CDC27P30260 824 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 FGD1P98174 961 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 TTLL4Q14679 1199 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 PGM5Q15124 567 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 BRF1Q92994 677 aa17.68■□□□□ 0.42
SEC22C-208ENST00000445388 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
SEC22C-208ENST00000445388 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 GOLGA8BA8MQT2 603 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
SEC22C-208ENST00000445388 RGS20O76081 388 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 MYL3P08590 195 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
SEC22C-208ENST00000445388 FUT2Q10981 343 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 RTN1Q16799 776 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 VSIG10LQ86VR7 867 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SEC22C-208ENST00000445388 BADQ92934 168 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 TMEM39AQ9NV64 488 aa17.67■□□□□ 0.42
SEC22C-208ENST00000445388 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
SEC22C-208ENST00000445388 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms