RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 FAM133AQ8N9E0 248 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 RIN2Q8WYP3 895 aaPredicted RBP11.18□□□□□ -0.62
RPE-209ENST00000438191 MTG1Q9BT17 334 aaPredicted RBP11.18□□□□□ -0.62
RPE-209ENST00000438191 PDGFCQ9NRA1 345 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 RAI14Q9P0K7 980 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 MYL3P08590 195 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 SP9P0CG40 484 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
RPE-209ENST00000438191 BMPR1AP36894 532 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 IQSEC1Q6DN90 963 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
RPE-209ENST00000438191 TSR2Q969E8 191 aaKnown RBP11.17□□□□□ -0.62
RPE-209ENST00000438191 PPP2R3CQ969Q6 453 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
RPE-209ENST00000438191 TGM1P22735 817 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 PTGISQ16647 500 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
RPE-209ENST00000438191 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 KDF1Q8NAX2 398 aaPredicted RBP11.16□□□□□ -0.62
RPE-209ENST00000438191 TOP1MTQ969P6 601 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 SRCIN1Q9C0H9 1055 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 VCPKMTQ9H867 229 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 HMG20BQ9P0W2 317 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 TMX2Q9Y320 296 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 COL4A3Q01955 1670 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
RPE-209ENST00000438191 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 SLC30A4O14863 429 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 C1QTNF9P0C862 333 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 CKBP12277 381 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 NRIP1P48552 1158 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 FIBCD1Q8N539 461 aa11.15□□□□□ -0.62
RPE-209ENST00000438191 HELZ2Q9BYK8 2649 aaKnown RBP11.15□□□□□ -0.62
RPE-209ENST00000438191 KINO60870 393 aaKnown RBP11.14□□□□□ -0.63
RPE-209ENST00000438191 UPP2O95045 317 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 ASGR2P07307 311 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 PRR23BQ6ZRT6 265 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 RBM23Q86U06 439 aaKnown RBP11.14□□□□□ -0.63
RPE-209ENST00000438191 DBF4BQ8NFT6 615 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 S1PR5Q9H228 398 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
RPE-209ENST00000438191 NR2E1Q9Y466 385 aa11.14□□□□□ -0.63
RPE-209ENST00000438191 C2CD4DB7Z1M9 353 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 DNAJB1P25685 340 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 CPT1AP50416 773 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 RBM10P98175 930 aaKnown RBP11.13□□□□□ -0.63
RPE-209ENST00000438191 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 SOWAHCQ53LP3 525 aaPredicted RBP11.13□□□□□ -0.63
RPE-209ENST00000438191 N4BP2L1Q5TBK1 243 aaPredicted RBP11.13□□□□□ -0.63
RPE-209ENST00000438191 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
RPE-209ENST00000438191 UNQ6494/PRO21346Q6UXR6 183 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 VN1R2Q8NFZ6 395 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 USP18Q9UMW8 372 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 RWDD3Q9Y3V2 267 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 DDX49Q9Y6V7 483 aaKnown RBP11.13□□□□□ -0.63
RPE-209ENST00000438191 CEP295Q9C0D2 2601 aa11.13□□□□□ -0.63
RPE-209ENST00000438191 ASB14A6NK59 587 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
RPE-209ENST00000438191 MPHOSPH10O00566 681 aaKnown RBP11.12□□□□□ -0.63
RPE-209ENST00000438191 CIAO1O76071 339 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 TIMM10P62072 90 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 DUSP28Q4G0W2 176 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 NAA16Q6N069 864 aaPredicted RBP11.12□□□□□ -0.63
RPE-209ENST00000438191 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 CLEC10AQ8IUN9 316 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 FBXO16Q8IX29 292 aaPredicted RBP11.12□□□□□ -0.63
RPE-209ENST00000438191 SPATA5Q8NB90 893 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 NETO1Q8TDF5 533 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
RPE-209ENST00000438191 ERVK-5Q9HDB9 667 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 PARD6AQ9NPB6 346 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 PLAGL2Q9UPG8 496 aa11.12□□□□□ -0.63
RPE-209ENST00000438191 E9PSI1 815 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 PLCD1P51178 756 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
RPE-209ENST00000438191 GABPAQ06546 454 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 IL17RAQ96F46 866 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 XAGE2Q96GT9 111 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
RPE-209ENST00000438191 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
RPE-209ENST00000438191 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms