RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
SGCE-205ENST00000437425 ZC3H4Q9UPT8 1303 aaKnown RBP17.3■□□□□ 0.36
SGCE-205ENST00000437425 BMP6P22004 513 aa17.29■□□□□ 0.36
SGCE-205ENST00000437425 BACE1P56817 501 aa17.29■□□□□ 0.36
SGCE-205ENST00000437425 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
SGCE-205ENST00000437425 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
SGCE-205ENST00000437425 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
SGCE-205ENST00000437425 A0A087WWV3 80 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 RPN1P04843 607 aaKnown RBP17.28■□□□□ 0.36
SGCE-205ENST00000437425 PLCG1P19174 1290 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 INPP5BP32019 993 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 EPS15P42566 896 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 GHRHRQ02643 423 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 DPY19L2Q6NUT2 758 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 GLIS2Q9BZE0 524 aaPredicted RBP17.28■□□□□ 0.36
SGCE-205ENST00000437425 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
SGCE-205ENST00000437425 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
SGCE-205ENST00000437425 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 OPLAHO14841 1288 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 ZBED4O75132 1171 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 PTPRAP18433 802 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 CDC25AP30304 524 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 SNAP25P60880 206 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 STIM1Q13586 685 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 HYIQ5T013 277 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 HAUS3Q68CZ6 603 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 SV2BQ7L1I2 683 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 ERMNQ8TAM6 284 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 HAS1Q92839 578 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 DCPSQ96C86 337 aaKnown RBP17.27■□□□□ 0.36
SGCE-205ENST00000437425 SLC38A10Q9HBR0 1119 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 CCPG1Q9ULG6 757 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.36
SGCE-205ENST00000437425 VCAM1P19320 739 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 ZNF76P36508 570 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 MTMR2Q13614 643 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 CUL4BQ13620 913 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
SGCE-205ENST00000437425 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 MTRQ99707 1265 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
SGCE-205ENST00000437425 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 CFBP00751 764 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
SGCE-205ENST00000437425 OAZ1P54368 228 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 GSDMDP57764 484 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 SPP2Q13103 211 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 SULF1Q8IWU6 871 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
SGCE-205ENST00000437425 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
SGCE-205ENST00000437425 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
SGCE-205ENST00000437425 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 PPP1R12BO60237 982 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 FLOT1O75955 427 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 CLCN1P35523 988 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 HSD17B4P51659 736 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 FANCCQ00597 558 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 ETNPPLQ8TBG4 499 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 L3MBTL3Q96JM7 780 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 FBXO28Q9NVF7 368 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 RWDD2AQ9UIY3 292 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
SGCE-205ENST00000437425 NFE2L3Q9Y4A8 694 aa17.25■□□□□ 0.35
SGCE-205ENST00000437425 GOLGB1Q14789 3259 aaKnown RBP17.24■□□□□ 0.35
SGCE-205ENST00000437425 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 PVALEFA0A1B0GWK0 134 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 SERPINC1P01008 464 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 GRB10Q13322 594 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 COBLL1Q53SF7 1204 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 PRR16Q569H4 304 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 ZNF784Q8NCA9 323 aaPredicted RBP17.24■□□□□ 0.35
SGCE-205ENST00000437425 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
SGCE-205ENST00000437425 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
SGCE-205ENST00000437425 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
SGCE-205ENST00000437425 ZNF18P17022 549 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 CDK11BP21127 795 aaKnown RBP17.23■□□□□ 0.35
SGCE-205ENST00000437425 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms