RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 PICK1Q9NRD5 415 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
SEMA3F-206ENST00000434342 PALM3A6NDB9 673 aaPredicted RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 FCER1AP12319 257 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 GPSM2P81274 684 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 E2F5Q15329 346 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 RRP36Q96EU6 259 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 NAPGQ99747 312 aaPredicted RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 ZNF287Q9HBT7 754 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 MYH13Q9UKX3 1938 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 MYH6P13533 1939 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 PPARDQ03181 441 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 STK4Q13043 487 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 TBCKQ8TEA7 893 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 TUBGCP2Q9BSJ2 902 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 PDS5AQ29RF7 1337 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-206ENST00000434342 NDUFA10O95299 355 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 KLK7P49862 253 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 RC3H1Q5TC82 1133 aaKnown RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 HDXQ7Z353 690 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 CLEC10AQ8IUN9 316 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 CEP112Q8N8E3 955 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 ZKSCAN4Q969J2 545 aaPredicted RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 AGPAT5Q9NUQ2 364 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 USP17L5A8MUK1 530 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 C11orf91Q3C1V1 193 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 COA7Q96BR5 231 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 CABS1Q96KC9 395 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 POLD4Q9HCU8 107 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 M0R2N6 131 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 KLRC4O43908 158 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 IDEP14735 1019 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 GNA11P29992 359 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 PNKPQ96T60 521 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
SEMA3F-206ENST00000434342 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 LGALS16A8MUM7 142 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 RNF40O75150 1001 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 GCFC2P16383 781 aaKnown RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 TRIM14Q14142 442 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CCDC122Q5T0U0 273 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 HDAC6Q9UBN7 1215 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 MAP2K7O14733 419 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 KIF3CO14782 793 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 RIMBP2O15034 1052 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 ANKRD40Q6AI12 368 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 PPP4CP60510 307 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 GALNT17Q6IS24 598 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 GIMAP8Q8ND71 665 aaPredicted RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 AFAP1L1Q8TED9 768 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 ZNHIT6Q9NWK9 470 aaKnown RBP13.56□□□□□ -0.24
SEMA3F-206ENST00000434342 CCDC151A5D8V7 595 aa13.55□□□□□ -0.24
SEMA3F-206ENST00000434342 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
SEMA3F-206ENST00000434342 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
SEMA3F-206ENST00000434342 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
SEMA3F-206ENST00000434342 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
SEMA3F-206ENST00000434342 MYBL2P10244 700 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms