RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 ZFHX2Q9C0A1 2572 aaPredicted RBP18.78■□□□□ 0.6
NUP50-209ENST00000432340 TMEM232C9JQI7 657 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 BCAR3O75815 825 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 ID4P47928 161 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 HTRA4P83105 476 aaPredicted RBP18.78■□□□□ 0.6
NUP50-209ENST00000432340 ZXDAP98168 799 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 CTR9Q6PD62 1173 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 MYOCDQ8IZQ8 938 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 ZNF444Q8N0Y2 327 aaPredicted RBP18.78■□□□□ 0.6
NUP50-209ENST00000432340 STAG1Q8WVM7 1258 aa18.78■□□□□ 0.6
NUP50-209ENST00000432340 DNAJC2Q99543 621 aaKnown RBP18.78■□□□□ 0.6
NUP50-209ENST00000432340 NBNO60934 754 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 CKBP12277 381 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 RARSP54136 660 aaKnown RBP18.77■□□□□ 0.6
NUP50-209ENST00000432340 SIGLEC14Q08ET2 396 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 CTC1Q2NKJ3 1217 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 FBXO11Q86XK2 927 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 TMEM192Q8IY95 271 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 CD207Q9UJ71 328 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 RWDD3Q9Y3V2 267 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 CACNA1HO95180 2353 aa18.77■□□□□ 0.6
NUP50-209ENST00000432340 PLA2G6O60733 806 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 LGR5O75473 907 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 RASA1P20936 1047 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 AVPR2P30518 371 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 SLC1A4P43007 532 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
NUP50-209ENST00000432340 TMEM63BQ5T3F8 832 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 C11orf84Q9BUA3 381 aaPredicted RBP18.76■□□□□ 0.59
NUP50-209ENST00000432340 PNMA2Q9UL42 364 aa18.76■□□□□ 0.59
NUP50-209ENST00000432340 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 RB1P06400 928 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 TRIM27P14373 513 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 ADD2P35612 726 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 LTBRP36941 435 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 PDE4DQ08499 809 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 GPNMBQ14956 572 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 UBE3CQ15386 1083 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 SBK1Q52WX2 424 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 C7orf31Q8N865 590 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 KATNAL1Q9BW62 490 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 MTMR4Q9NYA4 1195 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 CCPG1Q9ULG6 757 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
NUP50-209ENST00000432340 PDE4BQ07343 736 aa18.74■□□□□ 0.59
NUP50-209ENST00000432340 PTK7Q13308 1070 aa18.74■□□□□ 0.59
NUP50-209ENST00000432340 CLUL1Q15846 466 aa18.74■□□□□ 0.59
NUP50-209ENST00000432340 GIMAP6Q6P9H5 292 aa18.74■□□□□ 0.59
NUP50-209ENST00000432340 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
NUP50-209ENST00000432340 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 MCTP2Q6DN12 878 aa18.73■□□□□ 0.59
NUP50-209ENST00000432340 GDF6Q6KF10 455 aaPredicted RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 TRMT2AQ8IZ69 625 aaKnown RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
NUP50-209ENST00000432340 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
NUP50-209ENST00000432340 TECTAO75443 2155 aa18.72■□□□□ 0.59
NUP50-209ENST00000432340 IGKV6D-41A0A0C4DH26 115 aa18.72■□□□□ 0.59
NUP50-209ENST00000432340 KDM4AO75164 1064 aa18.72■□□□□ 0.59
NUP50-209ENST00000432340 BAATQ14032 418 aaPredicted RBP18.72■□□□□ 0.59
NUP50-209ENST00000432340 PAG1Q9NWQ8 432 aa18.72■□□□□ 0.59
NUP50-209ENST00000432340 GTF2IRD1Q9UHL9 959 aa18.72■□□□□ 0.59
NUP50-209ENST00000432340 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 PRR23AA6NEV1 266 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 H0Y858 1186 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 ICAM1P05362 532 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
NUP50-209ENST00000432340 NDUFV1P49821 464 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.71■□□□□ 0.59
NUP50-209ENST00000432340 TLR9Q9NR96 1032 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 WDFY4Q6ZS81 3184 aa18.71■□□□□ 0.59
NUP50-209ENST00000432340 MCM3APO60318 1980 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 GALR2O43603 387 aaPredicted RBP18.7■□□□□ 0.58
NUP50-209ENST00000432340 EYA4O95677 639 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 TSPY3P0CV98 308 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 TSPY8P0CW00 308 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 NBL1P41271 181 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 HYAL1Q12794 435 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 CBX2Q14781 532 aaPredicted RBP18.7■□□□□ 0.58
NUP50-209ENST00000432340 DNERQ8NFT8 737 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 SEPT8Q92599 483 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
NUP50-209ENST00000432340 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
NUP50-209ENST00000432340 NKD2Q969F2 451 aaPredicted RBP18.7■□□□□ 0.58
NUP50-209ENST00000432340 TOP1MTQ969P6 601 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 TANC1Q9C0D5 1861 aa18.7■□□□□ 0.58
NUP50-209ENST00000432340 SCN5AQ14524 2016 aa18.69■□□□□ 0.58
NUP50-209ENST00000432340 LOC730098B7Z3J9 87 aa18.69■□□□□ 0.58
NUP50-209ENST00000432340 C5orf67F2Z3F1 127 aa18.69■□□□□ 0.58
NUP50-209ENST00000432340 CTNNB1P35222 781 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms