RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MROH7Q68CQ1 1323 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SMAD3P84022 425 aaKnown RBP11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TNFAIP2Q03169 654 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FPGSQ05932 587 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 AKNAD1Q5T1N1 836 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 RILPL2Q969X0 211 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TTC14Q96N46 770 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SEPT9Q9UHD8 586 aaPredicted RBP11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 NEDD4P46934 1319 aa11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FRMPD2Q68DX3 1309 aaPredicted RBP11.08□□□□□ -0.64
CDC42-IT1-201ENST00000431803 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ARVCFO00192 962 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 NFIBO00712 420 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TIMP1P01033 207 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SMPD1P17405 629 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 NT5C2P49902 561 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PRSS12P56730 875 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ZNF543Q08ER8 600 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TLK2Q86UE8 772 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FBXO16Q8IX29 292 aaPredicted RBP11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 RNF41Q9H4P4 317 aaPredicted RBP11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 VTA1Q9NP79 307 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SPTBN5Q9NRC6 3674 aaKnown RBP11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PTGS1P23219 599 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PTPN5P54829 565 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 BEX3Q00994 111 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 BAATQ14032 418 aaPredicted RBP11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FSCN1Q16658 493 aaKnown RBP11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 IQSEC1Q6DN90 963 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 MFSD5Q6N075 450 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 LAPTM4BQ86VI4 370 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SLC43A3Q8NBI5 491 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ESR2Q92731 530 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 RNPC3Q96LT9 517 aaKnown RBP11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PNMA2Q9UL42 364 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 Q9Y3F1 56 aa11.06□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ZNF213O14771 459 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CABYRO75952 493 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CD4P01730 458 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CWC27Q6UX04 472 aaKnown RBP11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CXCL17Q6UXB2 119 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SLC30A10Q6XR72 485 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DIAPH3Q9NSV4 1193 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 GRIN2DO15399 1336 aa11.05□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 HIP1O00291 1037 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DYNC1LI2O43237 492 aaPredicted RBP11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 EDNRBP24530 442 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 RASIP1Q5U651 963 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CDX2Q99626 313 aaPredicted RBP11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DSCC1Q9BVC3 393 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 AP5M1Q9H0R1 490 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
CDC42-IT1-201ENST00000431803 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 PTPDC1A2A3K4 754 aa11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 DLL1O00548 723 aa11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 ZEB2O60315 1214 aa11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 KDM4AO75164 1064 aa11.03□□□□□ -0.64
CDC42-IT1-201ENST00000431803 CSF2RAP15509 400 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms