RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
CTSD-203ENST00000429746 PRO3102Q9H379 93 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 MAP3K20Q9NYL2 800 aaKnown RBP20.14■□□□□ 0.81
CTSD-203ENST00000429746 FAM184BQ9ULE4 1060 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 DNM1LO00429 736 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
CTSD-203ENST00000429746 RGS20O76081 388 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 PGK1P00558 417 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 SMPD1P17405 629 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 METAP2P50579 478 aaKnown RBP eCLIP20.13■□□□□ 0.81
CTSD-203ENST00000429746 FXR1P51114 621 aaKnown RBP eCLIP20.13■□□□□ 0.81
CTSD-203ENST00000429746 PKN1Q16512 942 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 SYNE3Q6ZMZ3 975 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 EEPD1Q7L9B9 569 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 SAMD3Q8N6K7 520 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.81
CTSD-203ENST00000429746 NCOA5Q9HCD5 579 aaKnown RBP20.13■□□□□ 0.81
CTSD-203ENST00000429746 XPNPEP3Q9NQH7 507 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
CTSD-203ENST00000429746 PIK3CDO00329 1044 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 RARBP10826 455 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 PPP2R5BQ15173 497 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 RMDN3Q96TC7 470 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 PDRG1Q9NUG6 133 aa20.12■□□□□ 0.81
CTSD-203ENST00000429746 ADAMTS3O15072 1205 aa20.11■□□□□ 0.81
CTSD-203ENST00000429746 ARIH2O95376 493 aa20.11■□□□□ 0.81
CTSD-203ENST00000429746 CST5P28325 142 aaPredicted RBP20.11■□□□□ 0.81
CTSD-203ENST00000429746 GJA9P57773 515 aa20.11■□□□□ 0.81
CTSD-203ENST00000429746 USP17L6PQ6QN14 398 aa20.11■□□□□ 0.81
CTSD-203ENST00000429746 ARRDC4Q8NCT1 418 aa20.11■□□□□ 0.81
CTSD-203ENST00000429746 NSUN6Q8TEA1 469 aaKnown RBP20.11■□□□□ 0.81
CTSD-203ENST00000429746 ZNF274Q96GC6 653 aaPredicted RBP20.11■□□□□ 0.81
CTSD-203ENST00000429746 RBM27Q9P2N5 1060 aaKnown RBP20.11■□□□□ 0.81
CTSD-203ENST00000429746 V9GY48 417 aaPredicted RBP20.11■□□□□ 0.81
CTSD-203ENST00000429746 GCOM1H8Y6P7 765 aaPredicted RBP20.1■□□□□ 0.81
CTSD-203ENST00000429746 STXBP3O00186 592 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 POLR2MP0CAP2 368 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
CTSD-203ENST00000429746 FGD1P98174 961 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 TRAF1Q13077 416 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 CCDC62Q6P9F0 684 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 IWS1Q96ST2 819 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 SEC63Q9UGP8 760 aaKnown RBP20.1■□□□□ 0.81
CTSD-203ENST00000429746 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 PHF24Q9UPV7 400 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
CTSD-203ENST00000429746 NR3C2P08235 984 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 IFNAR1P17181 557 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 BMP8BP34820 402 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 AK2P54819 239 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
CTSD-203ENST00000429746 TNFAIP2Q03169 654 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 PGM5Q15124 567 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 LRRC26Q2I0M4 334 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 DUSP28Q4G0W2 176 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 IQSEC1Q6DN90 963 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 PHKBQ93100 1093 aa20.09■□□□□ 0.81
CTSD-203ENST00000429746 PRPF3O43395 683 aaKnown RBP20.08■□□□□ 0.81
CTSD-203ENST00000429746 LARGE1O95461 756 aa20.08■□□□□ 0.81
CTSD-203ENST00000429746 MRPS9P82933 396 aaKnown RBP20.08■□□□□ 0.81
CTSD-203ENST00000429746 PDE4DQ08499 809 aa20.08■□□□□ 0.81
CTSD-203ENST00000429746 SNX17Q15036 470 aa20.08■□□□□ 0.81
CTSD-203ENST00000429746 PFKFB3Q16875 520 aaPredicted RBP20.08■□□□□ 0.81
CTSD-203ENST00000429746 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
CTSD-203ENST00000429746 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
CTSD-203ENST00000429746 PPFIA3O75145 1194 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 RBM25P49756 843 aaKnown RBP20.07■□□□□ 0.8
CTSD-203ENST00000429746 ST3GAL1Q11201 340 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 UBE2SQ16763 222 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 ARHGEF16Q5VV41 709 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 HEATR3Q7Z4Q2 680 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 C7orf61Q8IZ16 206 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 COPS5Q92905 334 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 WDR11Q9BZH6 1224 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 NAP1L2Q9ULW6 460 aaPredicted RBP20.07■□□□□ 0.8
CTSD-203ENST00000429746 Q9Y3F1 56 aa20.07■□□□□ 0.8
CTSD-203ENST00000429746 CCDC196A0A1B0GTZ2 297 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 CLK2P49760 499 aaKnown RBP20.06■□□□□ 0.8
CTSD-203ENST00000429746 SCRN1Q12765 414 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 TLK2Q86UE8 772 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 ZFP91Q96JP5 570 aaPredicted RBP20.06■□□□□ 0.8
CTSD-203ENST00000429746 GDF15Q99988 308 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 TSEN34Q9BSV6 310 aaKnown RBP20.06■□□□□ 0.8
CTSD-203ENST00000429746 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
CTSD-203ENST00000429746 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
CTSD-203ENST00000429746 PSTPIP2Q9H939 334 aa20.06■□□□□ 0.8
CTSD-203ENST00000429746 DOCK5Q9H7D0 1870 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 SCN10AQ9Y5Y9 1956 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 A0A1W2PQ45 241 aaPredicted RBP20.05■□□□□ 0.8
CTSD-203ENST00000429746 A0A1W2PQY0 241 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 hCG_1984214I3L0E3 225 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 PFKFB2O60825 505 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
CTSD-203ENST00000429746 CTDNEP1O95476 244 aa20.05■□□□□ 0.8
CTSD-203ENST00000429746 SCG2P13521 617 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms