RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
HDAC9-210ENST00000428307 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 BLOC1S4Q9NUP1 217 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 FBXO28Q9NVF7 368 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 A0A1B0GTH6 734 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 OPLAHO14841 1288 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 FCER1AP12319 257 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 GCFC2P16383 781 aaKnown RBP11.68□□□□□ -0.54
HDAC9-210ENST00000428307 USP11P51784 963 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 ADKP55263 362 aaKnown RBP11.68□□□□□ -0.54
HDAC9-210ENST00000428307 AMPD3Q01432 767 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 STK4Q13043 487 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 KCNB1Q14721 858 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 KCNK18Q7Z418 384 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 CCDC125Q86Z20 511 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 GIMAP8Q8ND71 665 aaPredicted RBP11.68□□□□□ -0.54
HDAC9-210ENST00000428307 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 LARP4BQ92615 738 aaKnown RBP11.68□□□□□ -0.54
HDAC9-210ENST00000428307 MAGEF1Q9HAY2 307 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
HDAC9-210ENST00000428307 CFBP00751 764 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 TNNT1P13805 278 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 GMPSP49915 693 aaPredicted RBP11.67□□□□□ -0.54
HDAC9-210ENST00000428307 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 C7orf25Q9BPX7 421 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 VPS16Q9H269 839 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 EXOC1Q9NV70 894 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
HDAC9-210ENST00000428307 MYMKA6NI61 221 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 NRDCO43847 1150 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 ASNSP08243 561 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 STAT3P40763 770 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 PRELPP51888 382 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 KRT31Q15323 416 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 E4F1Q66K89 784 aaPredicted RBP11.67□□□□□ -0.54
HDAC9-210ENST00000428307 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
HDAC9-210ENST00000428307 CYP2W1Q8TAV3 490 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 FEZ1Q99689 392 aa11.67□□□□□ -0.54
HDAC9-210ENST00000428307 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 PSMA7O14818 248 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 N4BP3O15049 544 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 SSBP05455 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC9-210ENST00000428307 UQCRHP07919 91 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 IDEP14735 1019 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 STIM1Q13586 685 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 CCDC47Q96A33 483 aaKnown RBP11.66□□□□□ -0.54
HDAC9-210ENST00000428307 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 ZNF341Q9BYN7 854 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 SLC39A2Q9NP94 309 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 CNOT7Q9UIV1 285 aaKnown RBP11.66□□□□□ -0.54
HDAC9-210ENST00000428307 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
HDAC9-210ENST00000428307 KCNJ18B7U540 433 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TBX2Q13207 712 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 DGKZQ13574 1117 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 CRYGNQ8WXF5 182 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 RAD54LQ92698 747 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TRIM47Q96LD4 638 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TEPSINQ96N21 525 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 NAP1L4Q99733 375 aaKnown RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 SRRTQ9BXP5 876 aaKnown RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 H7C1D1 291 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 FOSP01100 380 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 CYP3A7P24462 503 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 ZNF76P36508 570 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 UBXN2AP68543 259 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TCP11X2Q5H9J9 407 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 IRF2BP1Q8IU81 584 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 TC2NQ8N9U0 490 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 NLGN2Q8NFZ4 835 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 DDX12PQ92771 950 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-210ENST00000428307 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
HDAC9-210ENST00000428307 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 E9PMD0 336 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 PES1O00541 588 aaKnown RBP11.64□□□□□ -0.55
HDAC9-210ENST00000428307 SREBF1P36956 1147 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 TERF1P54274 439 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 TNFAIP1Q13829 316 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms