RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CNTN2Q02246 1040 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 CCDC144BQ3MJ40 725 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 DUSP28Q4G0W2 176 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 APOA5Q6Q788 366 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 RASGRP2Q7LDG7 609 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 STAG2Q8N3U4 1231 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 FANCBQ8NB91 859 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 SCFD2Q8WU76 684 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 PRO3102Q9H379 93 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 HOMER2Q9NSB8 354 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 MCM3APO60318 1980 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 ZEB2O60315 1214 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
SMC1A-203ENST00000428014 GOLGA8HP0CJ92 632 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 TAPT1Q6NXT6 567 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 TMTC3Q6ZXV5 915 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 ANKRD33Q7Z3H0 272 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 SYTL5Q8TDW5 730 aaPredicted RBP10.58□□□□□ -0.72
SMC1A-203ENST00000428014 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
SMC1A-203ENST00000428014 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
SMC1A-203ENST00000428014 ALDH8A1Q9H2A2 487 aaPredicted RBP10.58□□□□□ -0.72
SMC1A-203ENST00000428014 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
SMC1A-203ENST00000428014 PTPDC1A2A3K4 754 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 OPLAHO14841 1288 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
SMC1A-203ENST00000428014 TNFAIP2Q03169 654 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 STXBP2Q15833 593 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 BRDTQ58F21 947 aaPredicted RBP10.57□□□□□ -0.72
SMC1A-203ENST00000428014 BLOC1S2Q6QNY1 142 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 SLC39A5Q6ZMH5 540 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 SLC43A3Q8NBI5 491 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 DPF3Q92784 378 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
SMC1A-203ENST00000428014 SEC63Q9UGP8 760 aaKnown RBP10.57□□□□□ -0.72
SMC1A-203ENST00000428014 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
SMC1A-203ENST00000428014 ALPK3Q96L96 1907 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 BAZ2BQ9UIF8 2168 aaKnown RBP10.56□□□□□ -0.72
SMC1A-203ENST00000428014 A6NJR5 290 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 GCOM1H8Y6P7 765 aaPredicted RBP10.56□□□□□ -0.72
SMC1A-203ENST00000428014 MAFGO15525 162 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 ZBTB43O43298 467 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 POLR2MP0CAP2 368 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 TAL1P17542 331 aaPredicted RBP10.56□□□□□ -0.72
SMC1A-203ENST00000428014 CPT1AP50416 773 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 ACLYP53396 1101 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 PDE4DQ08499 809 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 PRAMEF19Q5SWL8 479 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 VSIG10LQ86VR7 867 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 DIS3LQ8TF46 1054 aaKnown RBP10.56□□□□□ -0.72
SMC1A-203ENST00000428014 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 RMDN3Q96TC7 470 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 MTMR7Q9Y216 660 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 SNX14Q9Y5W7 946 aa10.56□□□□□ -0.72
SMC1A-203ENST00000428014 ESYT2A0FGR8 921 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 CTAGE5O15320 804 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 DHX16O60231 1041 aaKnown RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 RPS6KB1P23443 525 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 ICAM3P32942 547 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 CDK7P50613 346 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 PTPN11Q06124 597 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 FUT2Q10981 343 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 ADCK5Q3MIX3 580 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 CCDC62Q6P9F0 684 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 PIGSQ96S52 555 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 GDF15Q99988 308 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 PDCD2LQ9BRP1 358 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 SENP6Q9GZR1 1112 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-203ENST00000428014 AP5M1Q9H0R1 490 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 SENP2Q9HC62 589 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
SMC1A-203ENST00000428014 KIAA1217Q5T5P2 1943 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 SCN10AQ9Y5Y9 1956 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 H0YGN5 161 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 NR3C2P08235 984 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 SMPD1P17405 629 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 CALML3P27482 149 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 SNAP25P60880 206 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms