RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SMARCA1P28370 1054 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 SGMS1Q86VZ5 419 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 RAB11FIP4Q86YS3 637 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 CMTR1Q8N1G2 835 aaKnown RBP21.27■■□□□ 1
SMARCAL1-205ENST00000425815 SLC43A3Q8NBI5 491 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 COPS5Q92905 334 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 IWS1Q96ST2 819 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 SPZ1Q9BXG8 430 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 ARVCFO00192 962 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 KIAA0355O15063 1070 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 CLTBP09497 229 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 HOXA13P31271 388 aaPredicted RBP21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 CCDC62Q6P9F0 684 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 DHX32Q7L7V1 743 aaKnown RBP21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 CTCFLQ8NI51 663 aaPredicted RBP21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 BADQ92934 168 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 VTI1AQ96AJ9 217 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 TCEANC2Q96MN5 208 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 MPHOSPH6Q99547 160 aaKnown RBP21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 PXMP2Q9NR77 195 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 PRKAG2Q9UGJ0 569 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 LAMA3Q16787 3333 aa21.26■□□□□ 0.99
SMARCAL1-205ENST00000425815 A0A0U1RQG5 324 aaPredicted RBP21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 B4DLN1 442 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 NR3C2P08235 984 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 EIF2AK2P19525 551 aaKnown RBP21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 KIF5BP33176 963 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 MRPL12P52815 198 aaKnown RBP21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 ARHGEF16Q5VV41 709 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 TDHQ8IZJ6 230 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 SAMD3Q8N6K7 520 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 LBHD1Q9BQE6 289 aaPredicted RBP21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 BRPF3Q9ULD4 1205 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
SMARCAL1-205ENST00000425815 TXNP10599 105 aaKnown RBP21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 HSPA4P34932 840 aa21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 STXBP2Q15833 593 aa21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 LZTS2Q9BRK4 669 aa21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 PDCD2LQ9BRP1 358 aa21.24■□□□□ 0.99
SMARCAL1-205ENST00000425815 DCDC2CA8MYV0 355 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 GCOM1H8Y6P7 765 aaPredicted RBP21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 ZEB2O60315 1214 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 EIF3JO75822 258 aaKnown RBP21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 CABYRO75952 493 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 RGS20O76081 388 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 POLR2MP0CAP2 368 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 CALM1P0DP23 149 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 CALM2P0DP24 149 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 CALM3P0DP25 149 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 GNAQP50148 359 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 PSMC6P62333 389 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 PPP2R5BQ15173 497 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 LY6KQ17RY6 165 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 SEPT14Q6ZU15 432 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 FAM126BQ8IXS8 530 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 OR6J1Q8NGC5 347 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 LRCH3Q96II8 777 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 TMEM39AQ9NV64 488 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 TBX21Q9UL17 535 aa21.23■□□□□ 0.99
SMARCAL1-205ENST00000425815 A6NJR5 290 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 CD4P01730 458 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 CPA1P15085 419 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 TRAF1Q13077 416 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 ITGA7Q13683 1181 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 TTLL4Q14679 1199 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 LRIT3Q3SXY7 679 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 VSIG10LQ86VR7 867 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 RRP36Q96EU6 259 aaKnown RBP21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 SNX14Q9Y5W7 946 aa21.22■□□□□ 0.99
SMARCAL1-205ENST00000425815 EPHB4P54760 987 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 PURAQ00577 322 aaKnown RBP21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 KRT32Q14532 448 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 PGM5Q15124 567 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 TMTC3Q6ZXV5 915 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 CCDC82Q8N4S0 544 aa21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 DDX41Q9UJV9 622 aaKnown RBP21.21■□□□□ 0.99
SMARCAL1-205ENST00000425815 hCG_1642624A0A1W2PR95 340 aa21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 C9orf50Q5SZB4 431 aa21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 FCHSD1Q86WN1 690 aa21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 MICU3Q86XE3 530 aa21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 ZFP91Q96JP5 570 aaPredicted RBP21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 FAM217BQ9NTX9 383 aaPredicted RBP21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 MROH7Q68CQ1 1323 aa21.2■□□□□ 0.98
SMARCAL1-205ENST00000425815 MEIS2O14770 477 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 TIMP1P01033 207 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 MYL3P08590 195 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 MYCLP12524 364 aaPredicted RBP21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 RAG1P15918 1043 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 CPT1AP50416 773 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 ARHGAP1Q07960 439 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms