RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 FZD1Q9UP38 647 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 BAZ2AQ9UIF9 1905 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 USP2O75604 605 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 SERPINC1P01008 464 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 EIF2AK2P19525 551 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 PPIL2Q13356 520 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 LRCH2Q5VUJ6 765 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 CHADLQ6NUI6 762 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 FAM20AQ96MK3 541 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 SLC25A27O95847 323 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 ATP2C1P98194 919 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 POSTNQ15063 836 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 SHROOM1Q2M3G4 852 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 KRBA2Q6ZNG9 492 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 DPP9Q86TI2 863 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TEPSINQ96N21 525 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TSG101Q99816 390 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 CUEDC2Q9H467 287 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 SERTAD1Q9UHV2 236 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TUBGCP6Q96RT7 1819 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 MAST2Q6P0Q8 1798 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 DDX39AO00148 427 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 FGFR1OPO95684 399 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 DSG3P32926 999 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 PRPHP41219 470 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 ZNF445P59923 1031 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 SP4Q02446 784 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TSR1Q2NL82 804 aaKnown RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 MIER3Q7Z3K6 550 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 CHST13Q8NET6 341 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.32□□□□□ -1.08
BDNF-209ENST00000420794 MAGEF1Q9HAY2 307 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 BAZ2BQ9UIF8 2168 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 MSNP26038 577 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 ANO6Q4KMQ2 910 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 NOL9Q5SY16 702 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 UIMC1Q96RL1 719 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 PARK7Q99497 189 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 CBFA2T2O43439 604 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 OAZ1P54368 228 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 KIF22Q14807 665 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 RANBP17Q9H2T7 1088 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 LRRC37AA6NMS7 1700 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 NOP56O00567 594 aaKnown RBP8.31□□□□□ -1.08
BDNF-209ENST00000420794 PPP1R2P41236 205 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 RESP18Q5W5W9 173 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 CCDC65Q8IXS2 484 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
BDNF-209ENST00000420794 QSER1Q2KHR3 1735 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 VWA5AO00534 786 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 PSMA7O14818 248 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 IRF6O14896 467 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 FCER1AP12319 257 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 DNAJC25Q9H1X3 360 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 ZNF112Q9UJU3 913 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 MYPNQ86TC9 1320 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 ARHGEF35A5YM69 484 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 TDP2O95551 362 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 BAATQ14032 418 aaPredicted RBP8.3□□□□□ -1.08
BDNF-209ENST00000420794 KARSQ15046 597 aaKnown RBP8.3□□□□□ -1.08
BDNF-209ENST00000420794 STXBP2Q15833 593 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 CEP55Q53EZ4 464 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 CATSPERGQ6ZRH7 1159 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 SLFN14P0C7P3 912 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 BRDTQ58F21 947 aaPredicted RBP8.3□□□□□ -1.08
BDNF-209ENST00000420794 EPSTI1Q96J88 318 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 SLC38A10Q9HBR0 1119 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 STK17AQ9UEE5 414 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 MRVI1Q9Y6F6 885 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 PFASO15067 1338 aa8.3□□□□□ -1.08
BDNF-209ENST00000420794 UNCXA6NJT0 531 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 TBX3O15119 743 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 FAM13AO94988 1023 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 GCLCP48506 637 aaPredicted RBP8.29□□□□□ -1.08
BDNF-209ENST00000420794 PRELPP51888 382 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 MTMR1Q13613 665 aa8.29□□□□□ -1.08
BDNF-209ENST00000420794 RRP1BQ14684 758 aaKnown RBP8.29□□□□□ -1.08
BDNF-209ENST00000420794 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
BDNF-209ENST00000420794 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
BDNF-209ENST00000420794 POTEDQ86YR6 584 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms