RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 EIF4E1BA6NMX2 242 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 AKR1B10O60218 316 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 KRT12Q99456 494 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 NOD2Q9HC29 1040 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 SPATS2LQ9NUQ6 558 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 L3MBTL1Q9Y468 752 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 PDE8AO60658 829 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 DEXIO95424 95 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 CSF1RP07333 972 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 PLIN2Q99541 437 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
NCKIPSD-204ENST00000416649 HMGB1P1B2RPK0 211 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 H7C1D1 291 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 GNPATO15228 680 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 RPN1P04843 607 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 TLDC1Q6P9B6 456 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 BARGINQ6ZT62 677 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 PIK3R5Q8WYR1 880 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 CALR3Q96L12 384 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 GCOM1H8Y6P7 765 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 MYZAPP0CAP1 466 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 PHKA1P46020 1223 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 PTGDRQ13258 359 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZNF658Q5TYW1 1059 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 AP1ARQ63HQ0 302 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 C3orf67Q6ZVT6 689 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 KLHL7Q8IXQ5 586 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 ARFGAP2Q8N6H7 521 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZBTB10Q96DT7 871 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 MTRQ99707 1265 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 TSGA10Q9BZW7 698 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 TJP1Q07157 1748 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.195e-6■■■■■ 34.6
NCKIPSD-204ENST00000416649 SH2D4AQ9H788 454 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-204ENST00000416649 DNM2P50570 870 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 KCNB1Q14721 858 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 MEA1Q16626 185 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 LMBR1Q8WVP7 490 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 STK36Q9NRP7 1315 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 ATP6V1G2O95670 118 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 MCAMP43121 646 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZBED6P86452 979 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 VPS72Q15906 364 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 PARD3BQ8TEW8 1205 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 CASKIN2Q8WXE0 1202 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 SLIT2O94813 1529 aa16.24■□□□□ 0.19
NCKIPSD-204ENST00000416649 PRKAB2O43741 272 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 WTAPQ15007 396 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 ERFEQ4G0M1 354 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 CFAP221Q4G0U5 840 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 GLE1Q53GS7 698 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 GKAP1Q5VSY0 366 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 PPP4R3AQ6IN85 833 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 SLC51AQ86UW1 340 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 NAPBQ9H115 298 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 FAM207AQ9NSI2 230 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 UTRNP46939 3433 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 ERICH2A1L162 156 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 GTPBP6O43824 516 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 CIAO1O76071 339 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 MCM7P33993 719 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 TBC1D1Q86TI0 1168 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 CSGALNACT2Q8N6G5 542 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 ZNF507Q8TCN5 953 aa16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-204ENST00000416649 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 AP1G2O75843 785 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 EIF4A3P38919 411 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 ELF3P78545 371 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 RASSF7Q02833 373 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 IFFO1Q0D2I5 559 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 CUL5Q93034 780 aa16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 PACSIN2Q9UNF0 486 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-204ENST00000416649 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms