RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HMGCS2P54868 508 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 NLRP12P59046 1061 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 PPATQ06203 517 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 PNOCQ13519 176 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 PDIA5Q14554 519 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 POSTNQ15063 836 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 HAS1Q92839 578 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 LENG9Q96B70 501 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 AGBL1Q96MI9 1066 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 BPIFA3Q9BQP9 254 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 MAF1Q9H063 256 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 ANO10Q9NW15 660 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 DDX25Q9UHL0 483 aaKnown RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 HOOK1Q9UJC3 728 aaKnown RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 SPDYE5A6NIY4 337 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 GCOM1H8Y6P7 765 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 FOXN1O15353 648 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 SLC26A4O43511 780 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 POLR2MP0CAP2 368 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 NF2P35240 595 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 C11orf57Q6ZUT1 292 aaPredicted RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 ANKRD13AQ8IZ07 590 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 IQUBQ8NA54 791 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 ANP32BQ92688 251 aaKnown RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 MMTAG2Q9BU76 263 aaKnown RBP6.24□□□□□ -1.41
EPHA4-202ENST00000409854 DISC1Q9NRI5 854 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 CCPG1Q9ULG6 757 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 KCNH4Q9UQ05 1017 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 CSADQ9Y600 493 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 UTRNP46939 3433 aa6.24□□□□□ -1.41
EPHA4-202ENST00000409854 A0A0G2JLL6 359 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PRR29P0C7W0 189 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TXLNAP40222 546 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 IQCB1Q15051 598 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 NAALADL2Q58DX5 795 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PRRT2Q7Z6L0 340 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TRIML1Q8N9V2 468 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PROCA1Q8NCQ7 364 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 RNF214Q8ND24 703 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ETNPPLQ8TBG4 499 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TBC1D5Q92609 795 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 DHX58Q96C10 678 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ATG4CQ96DT6 458 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PAGE5Q96GU1 130 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PDLIM2Q96JY6 352 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PPP1R9BQ96SB3 815 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 DNAJC25Q9H1X3 360 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 MAGEF1Q9HAY2 307 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CBX8Q9HC52 389 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TMOD4Q9NZQ9 345 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 IGLV3-22A0A075B6J6 115 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PP2D1A8MPX8 630 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ZBED4O75132 1171 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 HOXA13P31271 388 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 DPYDQ12882 1025 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PRKG1Q13976 671 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 COG2Q14746 738 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TMEM266Q2M3C6 531 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 LDLRAD1Q5T700 205 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ERO1BQ86YB8 467 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 MCF2L2Q86YR7 1114 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PDILTQ8N807 584 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CCDC34Q96HJ3 373 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 WNK4Q96J92 1243 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CUEDC2Q9H467 287 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ZNF214Q9UL59 606 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 RABGAP1Q9Y3P9 1069 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PCDHA5Q9Y5H7 936 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 ZNFX1Q9P2E3 1918 aaKnown RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CXCL11O14625 94 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CFBP00751 764 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 TECP42680 631 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PPIL2Q13356 520 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 KARSQ15046 597 aaKnown RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 HYIQ5T013 277 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CABP7Q86V35 215 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 SLFN12Q8IYM2 578 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 CEP57L1Q8IYX8 460 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 LRRC15Q8TF66 581 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 MTRQ99707 1265 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 RAB34Q9BZG1 259 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
EPHA4-202ENST00000409854 RAVER2Q9HCJ3 691 aaKnown RBP6.23□□□□□ -1.41
EPHA4-202ENST00000409854 PLXNB2O15031 1838 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 SPDYE16A6NNV3 312 aaPredicted RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 FAM86B1E9PN63 330 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 NFIBO00712 420 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 IRF6O14896 467 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 MYL1P05976 194 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 FAM86B2P0C5J1 330 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 UBA7P41226 1012 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TXKP42681 527 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 ZNF165P49910 485 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 SPIRE1Q08AE8 756 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 CCDC173Q0VFZ6 552 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 MOGSQ13724 837 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms