RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 PPARGC1AQ9UBK2 798 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-217ENST00000399641 PFDN6O15212 129 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 STX1BP61266 288 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 UNC45BQ8IWX7 931 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 CFAP36Q96G28 342 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 ARHGEF37A1IGU5 675 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 MRPS15P82914 257 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 IFT20Q8IY31 132 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 NSD2O96028 1365 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 ABCB4P21439 1286 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 SH3BGRP55822 239 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 ICA1Q05084 483 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 KIF19Q2TAC6 998 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 HAUS1Q96CS2 278 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 WARS2Q9UGM6 360 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 NEK2P51955 445 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 PAMP19021 973 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
CACNA1C-217ENST00000399641 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.47
CACNA1C-217ENST00000399641 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 TSC22D2O75157 780 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 MMP10P09238 476 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 SRGAP2BP0DMP2 458 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 TXLNGQ9NUQ3 528 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 SLC12A6Q9UHW9 1150 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 ANKRD36BQ8N2N9 1353 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 WDR91A4D1P6 747 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 PRDM1O75626 825 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 RANBP1P43487 201 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 NUDT18Q6ZVK8 323 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 PRIMPOLQ96LW4 560 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 ZNF711Q9Y462 761 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 ESRRGP62508 458 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 SIX5Q8N196 739 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 BBS5Q8N3I7 341 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 RNF40O75150 1001 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 SUPT3HO75486 399 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 GCNT3O95395 438 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 KRT71Q3SY84 523 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 FAM133BQ5BKY9 247 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 MAP7D3Q8IWC1 876 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 KLHL14Q9P2G3 628 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 CLCA2Q9UQC9 943 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 EFCAB14O75071 495 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 GNAT1P11488 350 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 OAS2P29728 719 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 HDDC2Q7Z4H3 204 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 LPIN2Q92539 896 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 NAPGQ99747 312 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 RAB20Q9NX57 234 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
CACNA1C-217ENST00000399641 KDM1AO60341 852 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 IMPDH2P12268 514 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 PPP1R16BQ96T49 567 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 SLC52A2Q9HAB3 445 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 MCF2P10911 925 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 GNGT1P63211 74 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 SCYL3Q8IZE3 742 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 MCM8Q9UJA3 840 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 ELP1O95163 1332 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 LRRIQ4A6NIV6 560 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 TOM1L1O75674 476 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 CAPN1P07384 714 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 CCDC142Q17RM4 750 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 CHMP1BQ7LBR1 199 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 CAPZA2P47755 286 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 SIK1P57059 783 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 BFSP1Q12934 665 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 ZNF594Q96JF6 807 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms