RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ZBTB38Q8NAP3 1195 aaPredicted RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 A0A0G2JLW4 131 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 TUBB4AP04350 444 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 DDIT3P35638 169 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 PDCD6IPQ8WUM4 868 aaKnown RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 HAUS1Q96CS2 278 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 PAK2Q13177 524 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 ME3Q16798 604 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 TMEM94Q12767 1356 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 KRT33BQ14525 404 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 LONRF2Q1L5Z9 754 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 HABP4Q5JVS0 413 aaKnown RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 UBL4BQ8N7F7 174 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 TDRD3Q9H7E2 651 aaKnown RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 GDAQ9Y2T3 454 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 WDR62O43379 1518 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 PIK3R2O00459 728 aa10.2□□□□□ -0.78
ATL3-201ENST00000398868 POLR2FP61218 127 aaKnown RBP10.2□□□□□ -0.78
ATL3-201ENST00000398868 ZBTB22O15209 634 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 THAP12O43422 761 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 PDE6AP16499 860 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RANBP1P43487 201 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 SZRD1Q7Z422 152 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 CCNYQ8ND76 341 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 TEKT3Q9BXF9 490 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RAD50Q92878 1312 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 HNRNPDLO14979 420 aaKnown RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 ZKSCAN8Q15776 578 aaPredicted RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 SEPT8Q92599 483 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 EXT2Q93063 718 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 XPO4Q9C0E2 1151 aaKnown RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 ZCWPW1Q9H0M4 648 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 TMEM63CQ9P1W3 806 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 FGAP02671 866 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 BCRP11274 1271 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 PEX26Q7Z412 305 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 KRT10P13645 584 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 PHEXP78562 749 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 PALM2Q8IXS6 379 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 SFMBT1Q9UHJ3 866 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 MRPL11Q9Y3B7 192 aaKnown RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 AFF2P51816 1311 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RPS6KA2Q15349 733 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 ARHGAP45Q92619 1136 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 LMCD1Q9NZU5 365 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 NRBP1Q9UHY1 535 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RPRD2Q5VT52 1461 aaKnown RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 COL17A1Q9UMD9 1497 aaPredicted RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 RALGAPBQ86X10 1494 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 PPFIA2O75334 1257 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 ZNF18P17022 549 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RAPH1Q70E73 1250 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 BLIDQ8IZY5 108 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 RAVER2Q9HCJ3 691 aaKnown RBP10.19□□□□□ -0.78
ATL3-201ENST00000398868 PLCB1Q9NQ66 1216 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 KLHL14Q9P2G3 628 aa10.19□□□□□ -0.78
ATL3-201ENST00000398868 KCNQ2O43526 872 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 RILPL1Q5EBL4 403 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 SFMBT2Q5VUG0 894 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 TEX2Q8IWB9 1127 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 TBC1D22AQ8WUA7 517 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 PRPF31Q8WWY3 499 aaKnown RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 THOC1Q96FV9 657 aaKnown RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 KRT12Q99456 494 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 PYCARDQ9ULZ3 195 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ZHX2Q9Y6X8 837 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 SBNO1A3KN83 1393 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 BTBD18B2RXH4 712 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 KCNK3O14649 394 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 SPDYE1Q8NFV5 336 aaPredicted RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 PIGSQ96S52 555 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 NFE2L3Q9Y4A8 694 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 RNF40O75150 1001 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 P4HA1P13674 534 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ZC4H2Q9NQZ6 224 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ARPP21Q9UBL0 812 aaPredicted RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 G3BP2Q9UN86 482 aaKnown RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 HLFQ16534 295 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 CFAP221Q4G0U5 840 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ODR4Q5SWX8 454 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 NLGN1Q8N2Q7 840 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 H7C0C1 242 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ENC1O14682 589 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 SLC8A1P32418 973 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 ATP5OP48047 213 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
ATL3-201ENST00000398868 CEP70Q8NHQ1 597 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms