RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 KCNT2Q6UVM3 1135 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 ZNF605Q86T29 641 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 LZTR1Q8N653 840 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 SH3TC2Q8TF17 1288 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 EPB41L4BQ9H329 900 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 KCNK12Q9HB15 430 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
CMC1-202ENST00000396610 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
CMC1-202ENST00000396610 A0A1W2PQJ5 194 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 MYO1BO43795 1136 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 MSCO60682 206 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 FUCA1P04066 466 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 DBHP09172 617 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 C6orf222P0C671 652 aaPredicted RBP6.25□□□□□ -1.41
CMC1-202ENST00000396610 BCL6P41182 706 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 RAB3GAP1Q15042 981 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 LONRF2Q1L5Z9 754 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 JAZF1Q86VZ6 243 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 SCUBE1Q8IWY4 988 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 NLGN2Q8NFZ4 835 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 PCDHA2Q9Y5H9 948 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
CMC1-202ENST00000396610 ASXL2Q76L83 1435 aa6.25□□□□□ -1.41
CMC1-202ENST00000396610 SRGAP3O43295 1099 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 C8AP07357 584 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 GLI4P10075 376 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 SQSTM1Q13501 440 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 PLEKHN1Q494U1 663 aaPredicted RBP6.24□□□□□ -1.41
CMC1-202ENST00000396610 WWC2Q6AWC2 1192 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 STYK1Q6J9G0 422 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 RPTNQ6XPR3 784 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 DCAF4Q8WV16 495 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 KISS1RQ969F8 398 aaPredicted RBP6.24□□□□□ -1.41
CMC1-202ENST00000396610 IPO9Q96P70 1041 aaKnown RBP6.24□□□□□ -1.41
CMC1-202ENST00000396610 SLC26A8Q96RN1 970 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 DHRS4Q9BTZ2 278 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 RXFP1Q9HBX9 757 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 DCP1AQ9NPI6 582 aaPredicted RBP6.24□□□□□ -1.41
CMC1-202ENST00000396610 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
CMC1-202ENST00000396610 PPARGC1AQ9UBK2 798 aaKnown RBP6.24□□□□□ -1.41
CMC1-202ENST00000396610 TRAF6Q9Y4K3 522 aa6.24□□□□□ -1.41
CMC1-202ENST00000396610 MPOP05164 745 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 ZC3H12BQ5HYM0 836 aaKnown RBP6.23□□□□□ -1.41
CMC1-202ENST00000396610 CABP7Q86V35 215 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 Q8N1Y9 231 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 PLEKHO2Q8TD55 490 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 USP33Q8TEY7 942 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 RNPC3Q96LT9 517 aaKnown RBP6.23□□□□□ -1.41
CMC1-202ENST00000396610 KLHL14Q9P2G3 628 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 HCFC2Q9Y5Z7 792 aa6.23□□□□□ -1.41
CMC1-202ENST00000396610 MRPL42Q9Y6G3 142 aaKnown RBP6.23□□□□□ -1.41
CMC1-202ENST00000396610 C22orf46C9J442 243 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 CYBBP04839 570 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 GTF2A2P52657 109 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 RSPO2Q6UXX9 243 aaPredicted RBP6.22□□□□□ -1.41
CMC1-202ENST00000396610 CEP68Q76N32 757 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 TMEM169Q96HH4 297 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 CHAMP1Q96JM3 812 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 CLDND1Q9NY35 253 aa6.22□□□□□ -1.41
CMC1-202ENST00000396610 MYOCOSA0A1B0GUC4 107 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 ESYT3A0FGR9 886 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 ZC3H12DA2A288 527 aaKnown RBP6.21□□□□□ -1.42
CMC1-202ENST00000396610 NTRK1P04629 796 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 VIPR1P32241 457 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 GPR85P60893 370 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 YBX1P67809 324 aaKnown RBP6.21□□□□□ -1.42
CMC1-202ENST00000396610 LSAMPQ13449 338 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 PAQR3Q6TCH7 311 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 MAMDC2Q7Z304 686 aaPredicted RBP6.21□□□□□ -1.42
CMC1-202ENST00000396610 TMC6Q7Z403 805 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
CMC1-202ENST00000396610 ZFYVE21Q9BQ24 234 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 MCOLN1Q9GZU1 580 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 ZNF552Q9H707 407 aaPredicted RBP6.21□□□□□ -1.42
CMC1-202ENST00000396610 TMEM260Q9NX78 707 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 NDOR1Q9UHB4 597 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 SIT1Q9Y3P8 196 aa6.21□□□□□ -1.42
CMC1-202ENST00000396610 HRKO00198 91 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 GRK2P25098 689 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 GRK3P35626 688 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 GABREP78334 506 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 MESP2Q0VG99 397 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 NR1I3Q14994 352 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 ZNF648Q5T619 568 aaPredicted RBP6.2□□□□□ -1.42
CMC1-202ENST00000396610 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 FBXO15Q8NCQ5 510 aaPredicted RBP6.2□□□□□ -1.42
CMC1-202ENST00000396610 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 TRMT2BQ96GJ1 504 aaKnown RBP6.2□□□□□ -1.42
CMC1-202ENST00000396610 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 SLC52A2Q9HAB3 445 aa6.2□□□□□ -1.42
CMC1-202ENST00000396610 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
CMC1-202ENST00000396610 X6R8D5 127 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms