RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 REV3LO60673 3130 aa13.53□□□□□ -0.24
HLA-DQA1-203ENST00000395363 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RAG1P15918 1043 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 EDNRBP24530 442 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CREB3L3Q68CJ9 461 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SEPT14Q6ZU15 432 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PCSK9Q8NBP7 692 aaKnown RBP13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TRPV6Q9H1D0 765 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SPC25Q9HBM1 224 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ADD3Q9UEY8 706 aaKnown RBP13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TBX21Q9UL17 535 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ABCB11O95342 1321 aa13.52□□□□□ -0.25
HLA-DQA1-203ENST00000395363 LOXHD1Q8IVV2 1947 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ARVCFO00192 962 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 KIAA0355O15063 1070 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PRC1O43663 620 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PLEKHA8P1O95397 391 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MYL3P08590 195 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CYP2C18P33260 490 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CDK7P50613 346 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CHMP4BP1P59074 171 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TROAPQ12815 778 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 DUSP28Q4G0W2 176 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ANKRD33Q7Z3H0 272 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 DEFB123Q8N688 67 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 OR6J1Q8NGC5 347 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ELP1O95163 1332 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 DCDC2CA8MYV0 355 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ACRP10323 421 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 IQSEC1Q6DN90 963 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CUL9Q8IWT3 2517 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ERICH2A1L162 156 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SH2B2O14492 632 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ZBTB5O15062 677 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 B4GALT4O60513 344 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MYCLP12524 364 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CPA1P15085 419 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CSF2RAP15509 400 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NKX3-2P78367 333 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PURAQ00577 322 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ITGA7Q13683 1181 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 FCHSD1Q86WN1 690 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 AMNQ9BXJ7 453 aa13.49□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RGS20O76081 388 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CD4P01730 458 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CYP2C9P11712 490 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 HSD17B4P51659 736 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CCL23P55773 120 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 FPGSQ05932 587 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 C16orf59Q7L2K0 433 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 DNERQ8NFT8 737 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PXMP2Q9NR77 195 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SIP14410 1827 aa13.48□□□□□ -0.25
HLA-DQA1-203ENST00000395363 GRXCR1A8MXD5 290 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TIMP1P01033 207 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ARHGAP1Q07960 439 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SART3Q15020 963 aaKnown RBP13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CCDC62Q6P9F0 684 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 AFG1LQ8WV93 481 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 SCLYQ96I15 445 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 WNT8AQ9H1J5 351 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms