RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 CAPRIN2Q6IMN6 1127 aaKnown RBP24.09■■□□□ 1.45
CLDND1-202ENST00000394180 BZW1Q7L1Q6 419 aaKnown RBP24.09■■□□□ 1.45
CLDND1-202ENST00000394180 PIK3R5Q8WYR1 880 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 PLCB1Q9NQ66 1216 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 SLC12A6Q9UHW9 1150 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 COL24A1Q17RW2 1714 aa24.09■■□□□ 1.45
CLDND1-202ENST00000394180 SMNDC1O75940 238 aaKnown RBP eCLIP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 EEF1GP26641 437 aaKnown RBP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 HSPA9P38646 679 aaKnown RBP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 UBXN1Q04323 297 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 PAK1Q13153 545 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 E2F5Q15329 346 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 KCTD16Q68DU8 428 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 GRAMD1CQ8IYS0 662 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 AIFM3Q96NN9 605 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 RIPOR2Q9Y4F9 1068 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 BUB1BO60566 1050 aaPredicted RBP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 CDC37Q16543 378 aaPredicted RBP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 MIS18BP1Q6P0N0 1132 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 TPTE2Q6XPS3 522 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 TMX4Q9H1E5 349 aaPredicted RBP24.08■■□□□ 1.45
CLDND1-202ENST00000394180 VPS16Q9H269 839 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 KIF9Q9HAQ2 790 aa24.08■■□□□ 1.45
CLDND1-202ENST00000394180 IFIT3O14879 490 aaKnown RBP24.07■■□□□ 1.44
CLDND1-202ENST00000394180 CDC25AP30304 524 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 KIAA0753Q2KHM9 967 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 SLC5A9Q2M3M2 681 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 GKAP1Q5VSY0 366 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-202ENST00000394180 APOA5Q6Q788 366 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 RUFY4Q6ZNE9 571 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 SGMS1Q86VZ5 419 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 NYXQ9GZU5 481 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 SWAP70Q9UH65 585 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 LEMD3Q9Y2U8 911 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 M0R2C6 588 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 FMNL1O95466 1100 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-202ENST00000394180 FIGNQ5HY92 759 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 AGBL2Q5U5Z8 902 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 ATG9AQ7Z3C6 839 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 ZNF507Q8TCN5 953 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 NSMCE1Q8WV22 266 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 LACRTQ9GZZ8 138 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 CTNND2Q9UQB3 1225 aa24.07■■□□□ 1.44
CLDND1-202ENST00000394180 LUC7L3O95232 432 aaKnown RBP24.06■■□□□ 1.44
CLDND1-202ENST00000394180 TM4SF1P30408 202 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 CCDC181Q5TID7 509 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 FERMT2Q96AC1 680 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 HVCN1Q96D96 273 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 ALS2CR12Q96Q35 445 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 RMND1Q9NWS8 449 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 PDS5AQ29RF7 1337 aaKnown RBP24.06■■□□□ 1.44
CLDND1-202ENST00000394180 ZNF213O14771 459 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 FGAP02671 866 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 ALADP13716 330 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 ZBED6P86452 979 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 GRIN1Q05586 938 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 SSRP1Q08945 709 aaKnown RBP24.06■■□□□ 1.44
CLDND1-202ENST00000394180 PDGFDQ9GZP0 370 aaPredicted RBP24.06■■□□□ 1.44
CLDND1-202ENST00000394180 SENP2Q9HC62 589 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 STK32BQ9NY57 414 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 TAB2Q9NYJ8 693 aa24.06■■□□□ 1.44
CLDND1-202ENST00000394180 NOP53Q9NZM5 478 aaKnown RBP24.06■■□□□ 1.44
CLDND1-202ENST00000394180 DNM2P50570 870 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 RPS6KA3P51812 740 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 CCDC38Q502W7 563 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 CNKSR1Q969H4 720 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 CENPTQ96BT3 561 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 CALR3Q96L12 384 aaKnown RBP24.05■■□□□ 1.44
CLDND1-202ENST00000394180 CSRNP2Q9H175 543 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 SLC39A2Q9NP94 309 aa24.05■■□□□ 1.44
CLDND1-202ENST00000394180 A0A1W2PQJ5 194 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 FOXP2O15409 715 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 NOC3LQ8WTT2 800 aaKnown RBP24.04■■□□□ 1.44
CLDND1-202ENST00000394180 TTYH3Q9C0H2 523 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 NHEJ1Q9H9Q4 299 aaPredicted RBP24.04■■□□□ 1.44
CLDND1-202ENST00000394180 GRID2IPA4D2P6 1211 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 IFNAR1P17181 557 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 MFN1Q8IWA4 741 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 CNBD1Q8NA66 436 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 FLAD1Q8NFF5 587 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 NUCKS1Q9H1E3 243 aaKnown RBP24.04■■□□□ 1.44
CLDND1-202ENST00000394180 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
CLDND1-202ENST00000394180 EYA2O00167 538 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 ZBTB43O43298 467 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 PPP1R12BO60237 982 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 LCA5LO95447 670 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 SPA17Q15506 151 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 OSBP2Q969R2 916 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 TAF1DQ9H5J8 278 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 THAP9Q9H5L6 903 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 SH3BP1Q9Y3L3 701 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 GCOM1H8Y6P7 765 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 ABLIM1O14639 778 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 ECM2O94769 699 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 SERPINB2P05120 415 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 RPSAP08865 295 aaKnown RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 MYZAPP0CAP1 466 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 CCNG1P51959 295 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 ZNF268Q14587 947 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms