RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ELF2Q15723 593 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 ARHGAP29Q52LW3 1261 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 TTI2Q6NXR4 508 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 FOXR2Q6PJQ5 311 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 TMEM179Q6ZVK1 233 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 UNC13DQ70J99 1090 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 CSGALNACT2Q8N6G5 542 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 SUPT20HQ8NEM7 779 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 CPLX3Q8WVH0 158 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 UBXN4Q92575 508 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 ZNF622Q969S3 477 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMAD1-202ENST00000394092 MTMR8Q96EF0 704 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 NT5C3AQ9H0P0 336 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 KANSL2Q9H9L4 492 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 TMEM260Q9NX78 707 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 DDX25Q9UHL0 483 aaKnown RBP8.05□□□□□ -1.12
SMAD1-202ENST00000394092 SERPINA10Q9UK55 444 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 STK24Q9Y6E0 443 aa8.05□□□□□ -1.12
SMAD1-202ENST00000394092 ABCB11O95342 1321 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 EP400Q96L91 3159 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 TRIM49BA6NDI0 452 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 PES1O00541 588 aaKnown RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 ECE2O60344 883 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 KRT9P35527 623 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 SLC1A4P43007 532 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 FXR1P51114 621 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 RBM5P52756 815 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 LRRC63Q05C16 580 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 TRAF1Q13077 416 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 PSMD2Q13200 908 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 FKBP15Q5T1M5 1219 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 MOXD1Q6UVY6 613 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 CREBRFQ8IUR6 639 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 TEX2Q8IWB9 1127 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 ZSCAN29Q8IWY8 852 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 MB21D1Q8N884 522 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 RAD54LQ92698 747 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 MKL1Q969V6 931 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 PLIN2Q99541 437 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 DBNDD1Q9H9R9 158 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 BMP2KQ9NSY1 1161 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 OGFRQ9NZT2 677 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 SYNPO2Q9UMS6 1093 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
SMAD1-202ENST00000394092 MRFAP1Q9Y605 127 aa8.04□□□□□ -1.12
SMAD1-202ENST00000394092 ATRNL1Q5VV63 1379 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 ENTPD3O75355 529 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 KIF20AO95235 890 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 TDP2O95551 362 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 MTIF2P46199 727 aaKnown RBP8.03□□□□□ -1.12
SMAD1-202ENST00000394092 ICA1Q05084 483 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 NFIAQ12857 509 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 MMRN1Q13201 1228 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 GRB10Q13322 594 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 GRIPAP1Q4V328 841 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 TMEM119Q4V9L6 283 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 DACT2Q5SW24 774 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 RAD9BQ6WBX8 426 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 OR8K1Q8NGG5 319 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 CNOT6LQ96LI5 555 aaKnown RBP8.03□□□□□ -1.12
SMAD1-202ENST00000394092 TSG101Q99816 390 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 TUBGCP2Q9BSJ2 902 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 DESI2Q9BSY9 194 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
SMAD1-202ENST00000394092 ZNHIT6Q9NWK9 470 aaKnown RBP8.03□□□□□ -1.12
SMAD1-202ENST00000394092 CAPN11Q9UMQ6 739 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 LOXHD1Q8IVV2 1947 aa8.03□□□□□ -1.12
SMAD1-202ENST00000394092 SLC37A4O43826 429 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 TADA3O75528 432 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 IPO7O95373 1038 aaKnown RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 FOSP01100 380 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 TRIM21P19474 475 aaKnown RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 CYLC1P35663 651 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 USP11P51784 963 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 MAP3K9P80192 1104 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 PPP2R3AQ06190 1150 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 HYIQ5T013 277 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 HAUS3Q68CZ6 603 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 SLFN13Q68D06 897 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 TATDN1Q6P1N9 297 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 KCTD1Q719H9 257 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 IRF2BP1Q8IU81 584 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 CLEC10AQ8IUN9 316 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 KIAA0825Q8IV33 1275 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 SMAP1Q8IYB5 467 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 SLFN12Q8IYM2 578 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 GUF1Q8N442 669 aaKnown RBP8.02□□□□□ -1.13
SMAD1-202ENST00000394092 CEP112Q8N8E3 955 aa8.02□□□□□ -1.13
SMAD1-202ENST00000394092 EHBP1Q8NDI1 1231 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms