RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 GAKO14976 1311 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
RFC3-201ENST00000380071 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 ZNF185O15231 689 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 KRT86O43790 486 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 SERPINB2P05120 415 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 ADCY7P51828 1080 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 ECM1Q16610 540 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 UBE2SQ16763 222 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 LARP4BQ92615 738 aaKnown RBP13.54□□□□□ -0.24
RFC3-201ENST00000380071 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
RFC3-201ENST00000380071 EIF3CQ99613 913 aaKnown RBP13.54□□□□□ -0.24
RFC3-201ENST00000380071 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 MACROD2A1Z1Q3 448 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFC3-201ENST00000380071 LRRC41Q15345 812 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 VWA3BQ502W6 1294 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
RFC3-201ENST00000380071 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 UNC13DQ70J99 1090 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 CCDC170Q8IYT3 715 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 UIMC1Q96RL1 719 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 USP21Q9UK80 565 aa13.54□□□□□ -0.24
RFC3-201ENST00000380071 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 SLURP2P0DP57 97 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 GYS1P13807 737 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 IDEP14735 1019 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 PPP1R2P41236 205 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 HNRNPH2P55795 449 aaKnown RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 GABPAQ06546 454 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 CASP8Q14790 479 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 FKBP15Q5T1M5 1219 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 SMCR8Q8TEV9 937 aaPredicted RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 CDK5RAP3Q96JB5 506 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 DDX4Q9NQI0 724 aaKnown RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 A0A1W2PQJ5 194 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 LRRIQ3A6PVS8 624 aaPredicted RBP13.53□□□□□ -0.24
RFC3-201ENST00000380071 TNNI2P48788 182 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 USP14P54578 494 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 RAD54LQ92698 747 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 JMJD4Q9H9V9 463 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 SIK3Q9Y2K2 1263 aa13.53□□□□□ -0.24
RFC3-201ENST00000380071 NHSQ6T4R5 1651 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.24
RFC3-201ENST00000380071 BBOX1O75936 387 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 SLC16A2P36021 539 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 ATP2B2Q01814 1243 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.24
RFC3-201ENST00000380071 WDR93Q6P2C0 686 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 DDX12PQ92771 950 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 MXD3Q9BW11 206 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 ARHGAP20Q9P2F6 1191 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 STK17AQ9UEE5 414 aa13.52□□□□□ -0.24
RFC3-201ENST00000380071 EP400Q96L91 3159 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 IPO7O95373 1038 aaKnown RBP13.52□□□□□ -0.25
RFC3-201ENST00000380071 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 PDIA5Q14554 519 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 PURBQ96QR8 312 aaKnown RBP13.52□□□□□ -0.25
RFC3-201ENST00000380071 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 VPS18Q9P253 973 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
RFC3-201ENST00000380071 TOM1O60784 492 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 ZMYND10O75800 440 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 VAV2P52735 878 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 CDK17Q00537 523 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 KIF5AQ12840 1032 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 KRT79Q5XKE5 535 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
RFC3-201ENST00000380071 HAS1Q92839 578 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 CALCOCO1Q9P1Z2 691 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 LY75O60449 1722 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms