RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TROVE2P10155 538 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 THOC5Q13769 683 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 CCDC157Q569K6 752 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ADALQ6DHV7 355 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ARHGAP24Q8N264 748 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 HSPH1Q92598 858 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 LOC102724428A0A0B4J2F2 783 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SPECC1L-ADORA2AF8WAN1 911 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SIK1P57059 783 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 TRIM68Q6AZZ1 485 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 GRK7Q8WTQ7 553 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 ADAM9Q13443 819 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 FAM8A1Q9UBU6 413 aa15.37■□□□□ 0.05
TRIM13-202ENST00000378182 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
TRIM13-202ENST00000378182 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 OPHN1O60890 802 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 USP14P54578 494 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 DBN1Q16643 649 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
TRIM13-202ENST00000378182 AFG1LQ8WV93 481 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 OR52Z1P0C646 297 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 RASGRP4Q8TDF6 673 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 CBX8Q9HC52 389 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ESRRBO95718 433 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ZNF341Q9BYN7 854 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 PMLP29590 882 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 MLKLQ8NB16 471 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ARMCX3Q9UH62 379 aaPredicted RBP15.36■□□□□ 0.05
TRIM13-202ENST00000378182 ARHGAP4P98171 946 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 SCN4BQ8IWT1 228 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 SIX6OS1Q8N1H7 587 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 B4GALNT4Q76KP1 1039 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 TEX2Q8IWB9 1127 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 HAUS8Q9BT25 410 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 SLC13A4Q9UKG4 626 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 NSFP46459 744 aaKnown RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 DCAF4L1Q3SXM0 396 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 ERVV-2B6SEH9 535 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 ADORA1P30542 326 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 PDE1BQ01064 536 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 RPGRIP1Q96KN7 1286 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 TTLL1O95922 423 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 HOXA13P31271 388 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 DDIT3P35638 169 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 TBCCQ15814 346 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 KRT10P13645 584 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
TRIM13-202ENST00000378182 CLIC6Q96NY7 704 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 XDHP47989 1333 aa15.35■□□□□ 0.05
TRIM13-202ENST00000378182 H0YCG3 227 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 N4BP1O75113 896 aaKnown RBP15.34■□□□□ 0.05
TRIM13-202ENST00000378182 PHEXP78562 749 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 PAK2Q13177 524 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 RCN2Q14257 317 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 PTK2Q05397 1052 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 GOLGA5Q8TBA6 731 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 TUBB4BP68371 445 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-202ENST00000378182 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-202ENST00000378182 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 TNKSO95271 1327 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 CDKL2Q92772 493 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM13-202ENST00000378182 COA7Q96BR5 231 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 MIS12Q9H081 205 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
TRIM13-202ENST00000378182 DARS2Q6PI48 645 aaKnown RBP15.33■□□□□ 0.05
TRIM13-202ENST00000378182 RPF1Q9H9Y2 349 aaKnown RBP15.33■□□□□ 0.05
TRIM13-202ENST00000378182 G3BP2Q9UN86 482 aaKnown RBP15.33■□□□□ 0.05
TRIM13-202ENST00000378182 GADD45BO75293 160 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-202ENST00000378182 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 PDXDC2PQ6P474 469 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 CALN1Q9BXU9 219 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 KDM2BQ8NHM5 1336 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 INHBAP08476 426 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 NPR1P16066 1061 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 YAF2Q8IY57 180 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 CPP00450 1065 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-202ENST00000378182 YWHAHQ04917 246 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-202ENST00000378182 LRRC41Q15345 812 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms