RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CC2D1AQ6P1N0 951 aaPredicted RBP15.59■□□□□ 0.09
HMGCL-203ENST00000374490 ZNF662Q6ZS27 426 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 EHBP1Q8NDI1 1231 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 ZNF507Q8TCN5 953 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 RAB34Q9BZG1 259 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 TRIM9Q9C026 710 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 FGFR1OPO95684 399 aaKnown RBP15.58■□□□□ 0.09
HMGCL-203ENST00000374490 GOLGA8HP0CJ92 632 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 ASIC1P78348 528 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 KRT83P78385 493 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 TERF2Q15554 542 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 PODNQ7Z5L7 613 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 CEP95Q96GE4 821 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 HAUS4Q9H6D7 363 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 ARFGAP3Q9NP61 516 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 CREBZFQ9NS37 354 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 ZNHIT6Q9NWK9 470 aaKnown RBP15.58■□□□□ 0.09
HMGCL-203ENST00000374490 MTMR7Q9Y216 660 aa15.58■□□□□ 0.09
HMGCL-203ENST00000374490 PVALEFA0A1B0GWK0 134 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 CCDC151A5D8V7 595 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 TRIM49BA6NDI0 452 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 ADCY7P51828 1080 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 PDE4DQ08499 809 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 FIGNQ5HY92 759 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 USP17L2Q6R6M4 530 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 SLC35F6Q8N357 371 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 ACRBPQ8NEB7 543 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 NAP1L4Q99733 375 aaKnown RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 DBNDD1Q9H9R9 158 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 SWAP70Q9UH65 585 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 MAPK8IP1Q9UQF2 711 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 EPN1Q9Y6I3 576 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 CDK5RAP2Q96SN8 1893 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 ABCB11O95342 1321 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 COBLO75128 1261 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 NDUFA10O95299 355 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 MEA1Q16626 185 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 FOXR2Q6PJQ5 311 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 ZNF771Q7L3S4 317 aaPredicted RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 TBCKQ8TEA7 893 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 C7orf43Q8WVR3 580 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 HNRNPLLQ8WVV9 542 aaKnown RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 PIGSQ96S52 555 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 DUSP9Q99956 384 aaKnown RBP15.57■□□□□ 0.08
HMGCL-203ENST00000374490 TUBGCP2Q9BSJ2 902 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 PARD6BQ9BYG5 372 aa15.57■□□□□ 0.08
HMGCL-203ENST00000374490 A0A1W2PQJ5 194 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 SLC26A4O43511 780 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 ERLIN1O75477 346 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 PDHBP11177 359 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 ZBED6P86452 979 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 PDIA5Q14554 519 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 FKBP15Q5T1M5 1219 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 SV2BQ7L1I2 683 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 CCDC170Q8IYT3 715 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 MSANTD4Q8NCY6 345 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
HMGCL-203ENST00000374490 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 MTMR4Q9NYA4 1195 aa15.56■□□□□ 0.08
HMGCL-203ENST00000374490 IGKV6D-41A0A0C4DH26 115 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
HMGCL-203ENST00000374490 ECE2O60344 883 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CAPN15O75808 1086 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 SNHG28P0DPA3 235 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 PLA2G4AP47712 749 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 PMS1P54277 932 aaKnown RBP15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CDK17Q00537 523 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 GABPAQ06546 454 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CALCRLQ16602 461 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 UNC13DQ70J99 1090 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 ZSCAN29Q8IWY8 852 aaPredicted RBP15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CNOT6LQ96LI5 555 aaKnown RBP15.55■□□□□ 0.08
HMGCL-203ENST00000374490 MTMR9Q96QG7 549 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 PLIN2Q99541 437 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 SLF1Q9BQI6 1058 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 IRX2Q9BZI1 471 aaPredicted RBP15.55■□□□□ 0.08
HMGCL-203ENST00000374490 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
HMGCL-203ENST00000374490 CTAGE15A4D2H0 777 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 USP17L5A8MUK1 530 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 RNF225M0QZC1 329 aaPredicted RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 PES1O00541 588 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 POTEIP0CG38 1075 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 POTEJP0CG39 1038 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 CTAGE8P0CG41 777 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 TECP42680 631 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 MTIF2P46199 727 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 PSMD2Q13200 908 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 CTAGE6Q86UF2 777 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms