RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 POLA2Q14181 598 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 CCDC122Q5T0U0 273 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 CAPN12Q6ZSI9 719 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 PSMB7Q99436 277 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 GCOM1H8Y6P7 765 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 KRT16P08779 473 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 ADD1P35611 737 aaKnown RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 MSH2P43246 934 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 CACNA2D1P54289 1103 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 RCN2Q14257 317 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 DDX23Q9BUQ8 820 aaKnown RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 TEX33O43247 280 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 GSTA1P08263 222 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 IDEP14735 1019 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 FLT3P36888 993 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 MTTPP55157 894 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 BEND3Q5T5X7 828 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SCUBE1Q8IWY4 988 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SREK1Q8WXA9 508 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 LRRC2Q9BYS8 371 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SAMD15Q9P1V8 674 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 PRELID1Q9Y255 219 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 TRPC1P48995 793 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 TUFMP49411 452 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SSH3Q8TE77 659 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 RASAL2Q9UJF2 1139 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 EFR3BQ9Y2G0 817 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ESYT3A0FGR9 886 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 DHX9Q08211 1270 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 MAP7Q14244 749 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 CREB3L3Q68CJ9 461 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 OR52E8Q6IFG1 317 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 BOLA2-SMG1P6H3BVE0 249 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 GSTA2P09210 222 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ARPC4P59998 168 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 SEPT7Q16181 437 aaKnown RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ZNF530Q6P9A1 599 aaPredicted RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 TRPM8Q7Z2W7 1104 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 CACNA2D4Q7Z3S7 1137 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 NUP88Q99567 741 aaPredicted RBP11.67□□□□□ -0.54
TRERF1-203ENST00000372917 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
TRERF1-203ENST00000372917 MAP2P11137 1827 aaKnown RBP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ADGRL3Q9HAR2 1447 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ACEP12821 1306 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 UBOX5O94941 541 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 NEK2P51955 445 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 CFAP157Q5JU67 520 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 UBE3BQ7Z3V4 1068 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SLC12A4Q9UP95 1085 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SPATA31D3P0C874 917 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 BCRP11274 1271 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ALADP13716 330 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SYKP43405 635 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 IFT74Q96LB3 600 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 ANKRD27Q96NW4 1050 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 INIPQ9NRY2 104 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 NKX1-2Q9UD57 310 aaPredicted RBP11.66□□□□□ -0.54
TRERF1-203ENST00000372917 FAM153BP0C7A2 387 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SCG2P13521 617 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 PEX5P50542 639 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 PHEXP78562 749 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 FAM153CQ494X1 144 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 OR2W6PQ8NHA6 318 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 DEPTORQ8TB45 409 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 AGBL1Q96MI9 1066 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 FAM153AQ9UHL3 310 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms