RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PPP1R42Q7Z4L9 355 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ANKRD2Q9GZV1 360 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 SEPT10Q9P0V9 454 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 DCTN3O75935 186 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 MSL3P1P0C860 447 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 LMNB2Q03252 620 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 FERMT1Q9BQL6 677 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 FUCA2Q9BTY2 467 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 MMRN2Q9H8L6 949 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 ZNF180Q9UJW8 692 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 ATP1A3P13637 1013 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 ATICP31939 592 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 RBL2Q08999 1139 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC153Q494R4 210 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 USP28Q96RU2 1077 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 KRT12Q99456 494 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC8Q9H0W5 538 aaPredicted RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 C6orf203Q9P0P8 240 aaPredicted RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 KRT10P13645 584 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 IL9RQ01113 521 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 P3H1Q32P28 736 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 DHX40Q8IX18 779 aaKnown RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
PRDM1-201ENST00000369089 PARP2Q9UGN5 583 aa11.34□□□□□ -0.59
PRDM1-201ENST00000369089 DTNBO60941 627 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 TRPA1O75762 1119 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 ADAMTS2O95450 1211 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 SERPINB6P35237 376 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.59
PRDM1-201ENST00000369089 PDXDC1Q6P996 788 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 PHC3Q8NDX5 983 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 MAK16Q9BXY0 300 aaKnown RBP11.33□□□□□ -0.59
PRDM1-201ENST00000369089 TRAF3IP3Q9Y228 551 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.59
PRDM1-201ENST00000369089 TTC37Q6PGP7 1564 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 SPAG7O75391 227 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 GCP02774 474 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 RPS6KB1P23443 525 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 EIF2B2P49770 351 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 STAT2P52630 851 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 CAPN12Q6ZSI9 719 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 KRI1Q8N9T8 703 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ENOX1Q8TC92 643 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TATDN2Q93075 761 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ANKZF1Q9H8Y5 726 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 LRCH1Q9Y2L9 728 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 KRT5P13647 590 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TSPY1Q01534 308 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 DCTN2Q13561 401 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TMCO4Q5TGY1 634 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 PATL1Q86TB9 770 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 NUDCD3Q8IVD9 361 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ZBTB8BQ8NAP8 495 aaPredicted RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 SNX29Q8TEQ0 813 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ZFAND2BQ8WV99 257 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TMOD2Q9NZR1 351 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ANO9A1A5B4 782 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 LDHAP00338 332 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 IL13P35225 146 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
PRDM1-201ENST00000369089 MED21Q13503 144 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 ANO5Q75V66 913 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 CHPF2Q9P2E5 772 aa11.33□□□□□ -0.6
PRDM1-201ENST00000369089 SH3BP5O60239 455 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 PNOCQ13519 176 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 HNRNPRO43390 633 aaKnown RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 PFKFB1P16118 471 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 ERCC5P28715 1186 aaPredicted RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 ECE1P42892 770 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 NDUFA8P51970 172 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 AKAP4Q5JQC9 854 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms